RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 MAP3K10Q02779 954 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 ARHGEF6Q15052 776 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 TNNI3KQ59H18 835 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 TBC1D9Q6ZT07 1266 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 ZSCAN29Q8IWY8 852 aaPredicted RBP24.26■■□□□ 1.47
SFXN1-203ENST00000502393 NSUN4Q96CB9 384 aaKnown RBP24.26■■□□□ 1.47
SFXN1-203ENST00000502393 KCNH4Q9UQ05 1017 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 FPGT-TNNI3KV9GXZ4 949 aa24.26■■□□□ 1.47
SFXN1-203ENST00000502393 PHF20L1A8MW92 1017 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 TLR2O60603 784 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 CCDC158Q5M9N0 1113 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 SH3BP5LQ7L8J4 393 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.25■■□□□ 1.47
SFXN1-203ENST00000502393 DDX4Q9NQI0 724 aaKnown RBP24.25■■□□□ 1.47
SFXN1-203ENST00000502393 RAI14Q9P0K7 980 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 PTPN22Q9Y2R2 807 aa24.25■■□□□ 1.47
SFXN1-203ENST00000502393 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
SFXN1-203ENST00000502393 NPM3O75607 178 aaKnown RBP24.24■■□□□ 1.47
SFXN1-203ENST00000502393 RHBDL3P58872 404 aa24.24■■□□□ 1.47
SFXN1-203ENST00000502393 PICALMQ13492 652 aa24.24■■□□□ 1.47
SFXN1-203ENST00000502393 HTTP42858 3142 aa24.23■■□□□ 1.47
SFXN1-203ENST00000502393 DDTLA6NHG4 134 aaPredicted RBP24.23■■□□□ 1.47
SFXN1-203ENST00000502393 TTC39AQ5SRH9 613 aa24.23■■□□□ 1.47
SFXN1-203ENST00000502393 LRP2BPQ9P2M1 347 aa24.23■■□□□ 1.47
SFXN1-203ENST00000502393 TNRC18O15417 2968 aaPredicted RBP24.23■■□□□ 1.47
SFXN1-203ENST00000502393 DOCK2Q92608 1830 aa24.22■■□□□ 1.47
SFXN1-203ENST00000502393 ANKRD23Q86SG2 305 aa24.22■■□□□ 1.47
SFXN1-203ENST00000502393 DBNDD2Q9BQY9 259 aa24.22■■□□□ 1.47
SFXN1-203ENST00000502393 CXCL11O14625 94 aa24.21■■□□□ 1.47
SFXN1-203ENST00000502393 CAP1Q01518 475 aa24.21■■□□□ 1.47
SFXN1-203ENST00000502393 SCYL3Q8IZE3 742 aa24.21■■□□□ 1.47
SFXN1-203ENST00000502393 ZNF512BQ96KM6 892 aaPredicted RBP24.21■■□□□ 1.47
SFXN1-203ENST00000502393 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
SFXN1-203ENST00000502393 MS4A1P11836 297 aa24.2■■□□□ 1.46
SFXN1-203ENST00000502393 PDHXO00330 501 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 TBC1D12O60347 775 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 CTNND1O60716 968 aaKnown RBP24.19■■□□□ 1.46
SFXN1-203ENST00000502393 IGSF3O75054 1194 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 PTPRAP18433 802 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 MOGSQ13724 837 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 CEP85Q6P2H3 762 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 SNRKQ9NRH2 765 aa24.19■■□□□ 1.46
SFXN1-203ENST00000502393 KIF22Q14807 665 aa24.18■■□□□ 1.46
SFXN1-203ENST00000502393 NOL10Q9BSC4 688 aaKnown RBP24.18■■□□□ 1.46
SFXN1-203ENST00000502393 ZHX2Q9Y6X8 837 aa24.18■■□□□ 1.46
SFXN1-203ENST00000502393 CENPFP49454 3210 aa24.18■■□□□ 1.46
SFXN1-203ENST00000502393 COL2A1P02458 1487 aaPredicted RBP24.18■■□□□ 1.46
SFXN1-203ENST00000502393 CYP2E1P05181 493 aaPredicted RBP24.17■■□□□ 1.46
SFXN1-203ENST00000502393 LACTBP83111 547 aaPredicted RBP24.17■■□□□ 1.46
SFXN1-203ENST00000502393 NAA16Q6N069 864 aaPredicted RBP24.17■■□□□ 1.46
SFXN1-203ENST00000502393 C17orf99Q6UX52 265 aa24.17■■□□□ 1.46
SFXN1-203ENST00000502393 ARMC5Q96C12 935 aa24.17■■□□□ 1.46
SFXN1-203ENST00000502393 OSBPL5Q9H0X9 879 aaPredicted RBP24.17■■□□□ 1.46
SFXN1-203ENST00000502393 DBNLQ9UJU6 430 aaKnown RBP24.17■■□□□ 1.46
SFXN1-203ENST00000502393 BAG3O95817 575 aa24.16■■□□□ 1.46
SFXN1-203ENST00000502393 GNRH1P01148 92 aa24.16■■□□□ 1.46
SFXN1-203ENST00000502393 FASTKD5Q7L8L6 764 aaKnown RBP24.16■■□□□ 1.46
SFXN1-203ENST00000502393 TEX11Q8IYF3 940 aa24.16■■□□□ 1.46
SFXN1-203ENST00000502393 EAF2Q96CJ1 260 aaPredicted RBP24.16■■□□□ 1.46
SFXN1-203ENST00000502393 AFG3L2Q9Y4W6 797 aa24.16■■□□□ 1.46
SFXN1-203ENST00000502393 A0A0G2JLL6 359 aaPredicted RBP24.15■■□□□ 1.46
SFXN1-203ENST00000502393 SLURP2P0DP57 97 aa24.15■■□□□ 1.46
SFXN1-203ENST00000502393 PLCG2P16885 1265 aa24.15■■□□□ 1.46
SFXN1-203ENST00000502393 PRRT2Q7Z6L0 340 aaPredicted RBP24.15■■□□□ 1.46
SFXN1-203ENST00000502393 ERC1Q8IUD2 1116 aa24.15■■□□□ 1.46
SFXN1-203ENST00000502393 CCDC8Q9H0W5 538 aaPredicted RBP24.15■■□□□ 1.46
SFXN1-203ENST00000502393 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.15■■□□□ 1.46
SFXN1-203ENST00000502393 ZAP70P43403 619 aa24.14■■□□□ 1.45
SFXN1-203ENST00000502393 PPP4CP60510 307 aa24.14■■□□□ 1.45
SFXN1-203ENST00000502393 GPAT2Q6NUI2 795 aa24.14■■□□□ 1.45
SFXN1-203ENST00000502393 SH3RF3Q8TEJ3 882 aaPredicted RBP24.14■■□□□ 1.45
SFXN1-203ENST00000502393 PARK7Q99497 189 aaKnown RBP24.14■■□□□ 1.45
SFXN1-203ENST00000502393 TLR7Q9NYK1 1049 aaKnown RBP24.14■■□□□ 1.45
SFXN1-203ENST00000502393 NBPF11Q86T75 865 aa24.13■■□□□ 1.45
SFXN1-203ENST00000502393 ARHGAP39Q9C0H5 1083 aa24.13■■□□□ 1.45
SFXN1-203ENST00000502393 AATFQ9NY61 560 aaKnown RBP eCLIP24.13■■□□□ 1.45
SFXN1-203ENST00000502393 CPA4Q9UI42 421 aa24.13■■□□□ 1.45
SFXN1-203ENST00000502393 PTCH2Q9Y6C5 1203 aa24.13■■□□□ 1.45
SFXN1-203ENST00000502393 ADGRA2Q96PE1 1338 aa24.12■■□□□ 1.45
SFXN1-203ENST00000502393 MAST2Q6P0Q8 1798 aa24.12■■□□□ 1.45
SFXN1-203ENST00000502393 HSP90AB4PQ58FF6 505 aa24.12■■□□□ 1.45
SFXN1-203ENST00000502393 DHX36Q9H2U1 1008 aaKnown RBP24.12■■□□□ 1.45
SFXN1-203ENST00000502393 EXOC6BQ9Y2D4 811 aa24.12■■□□□ 1.45
SFXN1-203ENST00000502393 PRMT2P55345 433 aa24.11■■□□□ 1.45
SFXN1-203ENST00000502393 SLC9C1Q4G0N8 1177 aa24.11■■□□□ 1.45
SFXN1-203ENST00000502393 PIH1D3Q9NQM4 214 aaKnown RBP24.11■■□□□ 1.45
SFXN1-203ENST00000502393 PI4KBQ9UBF8 816 aa24.11■■□□□ 1.45
SFXN1-203ENST00000502393 HERC5Q9UII4 1024 aaKnown RBP24.11■■□□□ 1.45
SFXN1-203ENST00000502393 SLC45A1Q9Y2W3 748 aa24.11■■□□□ 1.45
SFXN1-203ENST00000502393 DOCK1Q14185 1865 aa24.11■■□□□ 1.45
SFXN1-203ENST00000502393 FAM196BA6NMK8 535 aa24.1■■□□□ 1.45
SFXN1-203ENST00000502393 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
SFXN1-203ENST00000502393 RPAP2Q8IXW5 612 aaPredicted RBP24.1■■□□□ 1.45
SFXN1-203ENST00000502393 ZNF333Q96JL9 665 aa24.1■■□□□ 1.45
SFXN1-203ENST00000502393 DDX19BQ9UMR2 479 aa24.1■■□□□ 1.45
SFXN1-203ENST00000502393 POTEFA5A3E0 1075 aa24.09■■□□□ 1.45
SFXN1-203ENST00000502393 TRIM75PA6NK02 468 aa24.09■■□□□ 1.45
SFXN1-203ENST00000502393 GADL1Q6ZQY3 521 aa24.09■■□□□ 1.45
SFXN1-203ENST00000502393 AACSQ86V21 672 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms