RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 OLFM4Q6UX06 510 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 CLEC17AQ6ZS10 378 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 TBC1D22AQ8WUA7 517 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 KRT23Q9C075 422 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 TOMM22Q9NS69 142 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 FAM205AQ6ZU69 1335 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 SBF1O95248 1867 aa9.51□□□□□ -0.89
PDZRN3-212ENST00000498048 ROBO3Q96MS0 1386 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 KLF18A0A0U1RQI7 1052 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 SH2B2O14492 632 aaPredicted RBP9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 STX6O43752 255 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 PDCP20941 246 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 CHRNA5P30532 468 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 SCRN1Q12765 414 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 RRP12Q5JTH9 1297 aaKnown RBP9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 GIMAP6Q6P9H5 292 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 MFSD6Q6ZSS7 791 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 CYB5R4Q7L1T6 521 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 FBXL16Q8N461 479 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 COA1Q9GZY4 146 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 ANGEL1Q9UNK9 670 aaKnown RBP9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 ZDHHC9Q9Y397 364 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 NID2Q14112 1375 aa9.5□□□□□ -0.89
PDZRN3-212ENST00000498048 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 PTPDC1A2A3K4 754 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 G3V3G9 751 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 JAK2O60674 1132 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 KDM4AO75164 1064 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 F13A1P00488 732 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 LDHCP07864 332 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 ZSCAN22P10073 491 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 SYT1P21579 422 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 USP5P45974 858 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 HMGN5P82970 282 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 SART3Q15020 963 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 DIXDC1Q155Q3 683 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 CERS3Q8IU89 383 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 CHMP4CQ96CF2 233 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 ZNF274Q96GC6 653 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 PDGFDQ9GZP0 370 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 RBBP6Q7Z6E9 1792 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-212ENST00000498048 COL4A5P29400 1685 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 DTNBO60941 627 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 BAG3O95817 575 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 BTDP43251 543 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 GTF2IP78347 998 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 GRIK5Q16478 980 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 TMEM67Q5HYA8 995 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 NFXL1Q6ZNB6 911 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 CDC37L1Q7L3B6 337 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 NCOA5Q9HCD5 579 aaKnown RBP9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 DCP1AQ9NPI6 582 aaPredicted RBP9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 GPHNQ9NQX3 736 aaPredicted RBP9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 ATP8A2Q9NTI2 1148 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 GAKO14976 1311 aa9.48□□□□□ -0.89
PDZRN3-212ENST00000498048 CYP2D7A0A087X1C5 515 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 ERICH2A1L162 156 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 GOLGA8AA7E2F4 631 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 IFIT3O14879 490 aaKnown RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 SLC3A2P08195 630 aaKnown RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 PCP11498 1178 aaKnown RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 PLCG2P16885 1265 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 PDIA3P30101 505 aaKnown RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 FOSBP53539 338 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 EVCP57679 992 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 WTAPQ15007 396 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 APOA5Q6Q788 366 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 MICU3Q86XE3 530 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 RAB11FIP4Q86YS3 637 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 SMARCC2Q8TAQ2 1214 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 SH3RF3Q8TEJ3 882 aaPredicted RBP9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 ESR2Q92731 530 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 DDX11Q96FC9 970 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 UBAC1Q9BSL1 405 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 DBNDD1Q9H9R9 158 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
PDZRN3-212ENST00000498048 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms