RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 KRT85P78386 507 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 GRAPQ13588 217 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 GRAPLQ8TC17 118 aaPredicted RBP13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 STAG1Q8WVM7 1258 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
SNRNP200-208ENST00000497539 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
SNRNP200-208ENST00000497539 DHX16O60231 1041 aaKnown RBP13.46□□□□□ -0.25
SNRNP200-208ENST00000497539 TRDNQ13061 729 aa13.46□□□□□ -0.25
SNRNP200-208ENST00000497539 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
SNRNP200-208ENST00000497539 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
SNRNP200-208ENST00000497539 TULP2O00295 520 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 GYG1P46976 350 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 RCAN1P53805 252 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 HAND2P61296 217 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 SMIM5Q71RC9 77 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 TSPYL1Q9H0U9 437 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 ANGEL1Q9UNK9 670 aaKnown RBP13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.26
SNRNP200-208ENST00000497539 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 GYS1P13807 737 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 PSMD1Q99460 953 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 KRT23Q9C075 422 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 KCNF1Q9H3M0 494 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 LIFRP42702 1097 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 FAM173BQ6P4H8 233 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 NAPBQ9H115 298 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 SH3BP1Q9Y3L3 701 aa13.45□□□□□ -0.26
SNRNP200-208ENST00000497539 NEDD4P46934 1319 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 NT5C2P49902 561 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 CAMK4Q16566 473 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 PRR5LQ6MZQ0 368 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 CYB5R4Q7L1T6 521 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 ANKRD31Q8N7Z5 1873 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 FGRP09769 529 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 AKNAD1Q5T1N1 836 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
SNRNP200-208ENST00000497539 QSER1Q2KHR3 1735 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 CYP7A1P22680 504 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 MAGEB6P1A0A0J9YX57 407 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 SLC4A4Q9Y6R1 1079 aa13.43□□□□□ -0.26
SNRNP200-208ENST00000497539 XDHP47989 1333 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 STK36Q9NRP7 1315 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 TTC6Q86TZ1 520 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 SPTLC3Q9NUV7 552 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 CHST3Q7LGC8 479 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 KIAA1524Q8TCG1 905 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 TACC3Q9Y6A5 838 aa13.42□□□□□ -0.26
SNRNP200-208ENST00000497539 PLSCR1O15162 318 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 ST5P78524 1137 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 VPS37DQ86XT2 251 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 BANK1Q8NDB2 785 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 H3BQV1 296 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 IRF6O14896 467 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 CDKL5O76039 1030 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 KLRK1P26718 216 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 RBM6P78332 1123 aaKnown RBP13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 SPTY2D1Q68D10 685 aaPredicted RBP13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 LEO1Q8WVC0 666 aaPredicted RBP13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 NCOA5Q9HCD5 579 aaKnown RBP13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
SNRNP200-208ENST00000497539 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 PRKAB2O43741 272 aa13.4□□□□□ -0.26
SNRNP200-208ENST00000497539 PTGS1P23219 599 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms