RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 IKBKBO14920 756 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 PPP6R2O75170 966 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 SERPINC1P01008 464 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 BMP6P22004 513 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 UBASH3AP57075 661 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 RESP18Q5W5W9 173 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 ARMT1Q9H993 441 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 ZBTB1Q9Y2K1 713 aa15.02□□□□□ -0.01
PTPN7-217ENST00000495688 BTBD18B2RXH4 712 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 PRKAB2O43741 272 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 CDKL5O76039 1030 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 SLU7O95391 586 aaKnown RBP15.01□□□□□ -0.01
PTPN7-217ENST00000495688 PDE4BQ07343 736 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 TTF1Q15361 905 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-217ENST00000495688 CFAP100Q494V2 611 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 ERO1AQ96HE7 468 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 TIGD1Q96MW7 591 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 FANCLQ9NW38 375 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 KCNJ14Q9UNX9 436 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 PCDHA5Q9Y5H7 936 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 ATRNO75882 1429 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 IFIT3O14879 490 aaKnown RBP15.01□□□□□ -0.01
PTPN7-217ENST00000495688 MBD4O95243 580 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 MYL5Q02045 173 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 RRP12Q5JTH9 1297 aaKnown RBP15.01□□□□□ -0.01
PTPN7-217ENST00000495688 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
PTPN7-217ENST00000495688 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 KCNH3Q9ULD8 1083 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 ECM29Q5VYK3 1845 aa15.01□□□□□ -0.01
PTPN7-217ENST00000495688 TRIM29Q14134 588 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 CNNM3Q8NE01 707 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 TMEM87BQ96K49 555 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 SLC12A7Q9Y666 1083 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 FANCGO15287 622 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 ARID4AP29374 1257 aaPredicted RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 RASGRF1Q13972 1273 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 HOMER1Q86YM7 354 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 JMYQ8N9B5 988 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 ZNF397Q8NF99 534 aaPredicted RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 NAPBQ9H115 298 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 TOMM22Q9NS69 142 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 TOB1P50616 345 aaPredicted RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 KRBA2Q6ZNG9 492 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 SGMS1Q86VZ5 419 aa15□□□□□ -0.01
PTPN7-217ENST00000495688 GTPBP4Q9BZE4 634 aaKnown RBP15□□□□□ -0.01
PTPN7-217ENST00000495688 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
PTPN7-217ENST00000495688 SPATA5Q8NB90 893 aa14.99□□□□□ -0.01
PTPN7-217ENST00000495688 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-217ENST00000495688 L2HGDHQ9H9P8 463 aa14.99□□□□□ -0.01
PTPN7-217ENST00000495688 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.99□□□□□ -0.01
PTPN7-217ENST00000495688 INTS13Q9NVM9 706 aa14.99□□□□□ -0.01
PTPN7-217ENST00000495688 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-217ENST00000495688 GRAMD1CQ8IYS0 662 aa14.99□□□□□ -0.01
PTPN7-217ENST00000495688 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
PTPN7-217ENST00000495688 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 PATL2C9JE40 543 aaKnown RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 ATP2B1P20020 1258 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 SSRP1Q08945 709 aaKnown RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 NR5A1Q13285 461 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 NOSTRINQ8IVI9 506 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 DIS3L2Q8IYB7 885 aaKnown RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 ZNF446Q9NWS9 450 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 DNAI1Q9UI46 699 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 MORC2Q9Y6X9 1032 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 GSG1L2A8MUP6 293 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 PDE8AO60658 829 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 CUTAO60888 179 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 FGFR2P21802 821 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 PUM3Q15397 648 aaKnown RBP14.98□□□□□ -0.01
PTPN7-217ENST00000495688 PDILTQ8N807 584 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 LPIN2Q92539 896 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 SEC31BQ9NQW1 1179 aa14.98□□□□□ -0.01
PTPN7-217ENST00000495688 MYH3P11055 1940 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 CCDC93Q567U6 631 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 LCORLQ8N3X6 602 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 KRI1Q8N9T8 703 aaKnown RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 SOS2Q07890 1332 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 POLR2DO15514 142 aaKnown RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 FMNL1O95466 1100 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 LIFRP42702 1097 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 ETF1P62495 437 aaKnown RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 FMR1Q06787 632 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 OLFM4Q6UX06 510 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 VSTM4Q8IW00 320 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 TRMT44Q8IYL2 757 aaKnown RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 FAM177A1Q8N128 213 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-217ENST00000495688 ST7Q9NRC1 585 aa14.97□□□□□ -0.01
PTPN7-217ENST00000495688 PCDHB6Q9Y5E3 794 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms