RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ENTPD3O75355 529 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 PLCG2P16885 1265 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 ARMC9Q7Z3E5 817 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 PLEKHM2Q8IWE5 1019 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 CAPNS2Q96L46 248 aa16.44■□□□□ 0.22
FDPS-219ENST00000495308 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■□□□□ 9.8
FDPS-219ENST00000495308 ATAD5Q96QE3 1844 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 DDTLA6NHG4 134 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 USP2O75604 605 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 PDE4AP27815 886 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 ZSCAN25Q6NSZ9 544 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 ZSCAN29Q8IWY8 852 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 HHIPL1Q96JK4 782 aa16.43■□□□□ 0.22
FDPS-219ENST00000495308 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 OSBPL5Q9H0X9 879 aaPredicted RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
FDPS-219ENST00000495308 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
FDPS-219ENST00000495308 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 FSD1Q9BTV5 496 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 FLT1P17948 1338 aa16.42■□□□□ 0.22
FDPS-219ENST00000495308 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
FDPS-219ENST00000495308 LAMB1P07942 1786 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 ATRNL1Q5VV63 1379 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 AOC2O75106 756 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
FDPS-219ENST00000495308 MBD4O95243 580 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 IREB2P48200 963 aaKnown RBP16.41■□□□□ 0.22
FDPS-219ENST00000495308 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 ARMT1Q9H993 441 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 DOCK1Q14185 1865 aa16.41■□□□□ 0.22
FDPS-219ENST00000495308 ECE1P42892 770 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 USP5P45974 858 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 LDLRAD1Q5T700 205 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 CERS3Q8IU89 383 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
FDPS-219ENST00000495308 OSBPL3Q9H4L5 887 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 SAP30BPQ9UHR5 308 aaKnown RBP16.4■□□□□ 0.22
FDPS-219ENST00000495308 MYH8P13535 1937 aa16.4■□□□□ 0.22
FDPS-219ENST00000495308 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 FAM155AB1AL88 458 aaPredicted RBP16.39■□□□□ 0.21
FDPS-219ENST00000495308 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 RNF113AO15541 343 aaKnown RBP16.39■□□□□ 0.21
FDPS-219ENST00000495308 SLC10A3P09131 477 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 DCAF15Q66K64 600 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
FDPS-219ENST00000495308 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.39■□□□□ 0.21
FDPS-219ENST00000495308 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 ZNF341Q9BYN7 854 aa16.39■□□□□ 0.21
FDPS-219ENST00000495308 ZFYP08048 801 aaPredicted RBP16.38■□□□□ 0.21
FDPS-219ENST00000495308 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
FDPS-219ENST00000495308 ANKRD13AQ8IZ07 590 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
FDPS-219ENST00000495308 OSBP2Q969R2 916 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
FDPS-219ENST00000495308 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
FDPS-219ENST00000495308 M0R2C6 588 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 PRKAB2O43741 272 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 VGLL4Q14135 290 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
FDPS-219ENST00000495308 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 JMYQ8N9B5 988 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 APPBP2Q92624 585 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 SEC62Q99442 399 aaKnown RBP16.37■□□□□ 0.21
FDPS-219ENST00000495308 PHIPQ8WWQ0 1821 aa16.37■□□□□ 0.21
FDPS-219ENST00000495308 INPP5BP32019 993 aa16.36■□□□□ 0.21
FDPS-219ENST00000495308 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
FDPS-219ENST00000495308 LRRFIP1Q32MZ4 808 aaKnown RBP16.36■□□□□ 0.21
FDPS-219ENST00000495308 SLC10A4Q96EP9 437 aa16.36■□□□□ 0.21
FDPS-219ENST00000495308 CSADQ9Y600 493 aa16.36■□□□□ 0.21
FDPS-219ENST00000495308 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
FDPS-219ENST00000495308 NOGQ13253 232 aa16.35■□□□□ 0.21
FDPS-219ENST00000495308 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
FDPS-219ENST00000495308 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
FDPS-219ENST00000495308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
FDPS-219ENST00000495308 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
FDPS-219ENST00000495308 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms