RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CIAO1O76071 339 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 PTPRAP18433 802 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 PRRT2Q7Z6L0 340 aaPredicted RBP17.73■□□□□ 0.43
VARS-228ENST00000495010 DZIP1Q86YF9 867 aaKnown RBP17.73■□□□□ 0.43
VARS-228ENST00000495010 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 GABRQQ9UN88 632 aa17.73■□□□□ 0.43
VARS-228ENST00000495010 E9PSI1 815 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 TNPO2O14787 897 aaKnown RBP17.72■□□□□ 0.43
VARS-228ENST00000495010 SGPL1O95470 568 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
VARS-228ENST00000495010 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 HDAC5Q9UQL6 1122 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 SLC45A1Q9Y2W3 748 aa17.72■□□□□ 0.43
VARS-228ENST00000495010 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 CAPN2P17655 700 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 IL15P40933 162 aaPredicted RBP17.71■□□□□ 0.43
VARS-228ENST00000495010 PHKA1P46020 1223 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 FLT3LGP49771 235 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 UBE2Q1Q7Z7E8 422 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 ABCF2Q9UG63 623 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 AFG3L2Q9Y4W6 797 aa17.71■□□□□ 0.43
VARS-228ENST00000495010 ZNF521Q96K83 1311 aa17.71■□□□□ 0.42
VARS-228ENST00000495010 CEP290O15078 2479 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 MGAMO43451 1857 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 TRIM75PA6NK02 468 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 EVI5O60447 810 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 CTNND1O60716 968 aaKnown RBP17.7■□□□□ 0.42
VARS-228ENST00000495010 INHAP05111 366 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 ELNP15502 786 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 PICALMQ13492 652 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 SPTY2D1Q68D10 685 aaPredicted RBP17.7■□□□□ 0.42
VARS-228ENST00000495010 PXYLP1Q8TE99 480 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 COA7Q96BR5 231 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
VARS-228ENST00000495010 TRIOBPQ9H2D6 2365 aa17.69■□□□□ 0.42
VARS-228ENST00000495010 ZBTB7BO15156 539 aaPredicted RBP17.69■□□□□ 0.42
VARS-228ENST00000495010 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
VARS-228ENST00000495010 CCDC102BQ68D86 513 aa17.69■□□□□ 0.42
VARS-228ENST00000495010 PNMA3Q9UL41 463 aa17.69■□□□□ 0.42
VARS-228ENST00000495010 DDTLA6NHG4 134 aaPredicted RBP17.68■□□□□ 0.42
VARS-228ENST00000495010 BTDP43251 543 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 IRF5Q13568 498 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 SH3BP5LQ7L8J4 393 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 GAKO14976 1311 aa17.68■□□□□ 0.42
VARS-228ENST00000495010 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
VARS-228ENST00000495010 MAP3K10Q02779 954 aa17.67■□□□□ 0.42
VARS-228ENST00000495010 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
VARS-228ENST00000495010 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
VARS-228ENST00000495010 PA2G4Q9UQ80 394 aaKnown RBP17.67■□□□□ 0.42
VARS-228ENST00000495010 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
VARS-228ENST00000495010 ADORA1P30542 326 aa17.66■□□□□ 0.42
VARS-228ENST00000495010 ERICH6Q7L0X2 663 aa17.66■□□□□ 0.42
VARS-228ENST00000495010 FAM163AQ96GL9 167 aaPredicted RBP17.66■□□□□ 0.42
VARS-228ENST00000495010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.66■□□□□ 0.42
VARS-228ENST00000495010 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
VARS-228ENST00000495010 A0A1W2PPC1 479 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 TIMM10P62072 90 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 SLFN5Q08AF3 891 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 PABPC4Q13310 644 aaKnown RBP eCLIP17.65■□□□□ 0.42
VARS-228ENST00000495010 RASGRF1Q13972 1273 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 DDX4Q9NQI0 724 aaKnown RBP17.65■□□□□ 0.42
VARS-228ENST00000495010 MROH7-TTC4A0A0A0MT08 1334 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
VARS-228ENST00000495010 ZBTB22O15209 634 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 MVPQ14764 893 aaKnown RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 FAM110CQ1W6H9 321 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 CCDC84Q86UT8 332 aaPredicted RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 PROCA1Q8NCQ7 364 aaPredicted RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 COPRSQ9NQ92 184 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 PAK6Q9NQU5 681 aaPredicted RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 PDS5AQ29RF7 1337 aaKnown RBP17.64■□□□□ 0.41
VARS-228ENST00000495010 RFX7Q2KHR2 1363 aa17.64■□□□□ 0.41
VARS-228ENST00000495010 TBC1D12O60347 775 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 LDHCP07864 332 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 GSTO1P78417 241 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 MECOMQ03112 1051 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 TREML2Q5T2D2 321 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 SLC17A8Q8NDX2 589 aa17.63■□□□□ 0.41
VARS-228ENST00000495010 PAWRQ96IZ0 340 aaKnown RBP17.63■□□□□ 0.41
VARS-228ENST00000495010 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
VARS-228ENST00000495010 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 A0A1B0GUL7 405 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 GCLCP48506 637 aaPredicted RBP17.62■□□□□ 0.41
VARS-228ENST00000495010 SPP2Q13103 211 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 GORABQ5T7V8 394 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 ZNF280CQ8ND82 737 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
VARS-228ENST00000495010 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.418e-6■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms