RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 FOXN1O15353 648 aa25.2■■□□□ 1.62
CCDC12-207ENST00000494655 NPM3O75607 178 aaKnown RBP25.2■■□□□ 1.62
CCDC12-207ENST00000494655 ZBTB48P10074 688 aaPredicted RBP25.2■■□□□ 1.62
CCDC12-207ENST00000494655 CLMNQ96JQ2 1002 aa25.2■■□□□ 1.62
CCDC12-207ENST00000494655 BOLA2Q9H3K6 86 aa25.2■■□□□ 1.62
CCDC12-207ENST00000494655 RWDD1Q9H446 243 aaPredicted RBP25.2■■□□□ 1.62
CCDC12-207ENST00000494655 COL2A1P02458 1487 aaPredicted RBP25.2■■□□□ 1.62
CCDC12-207ENST00000494655 MYH7P12883 1935 aa25.2■■□□□ 1.62
CCDC12-207ENST00000494655 MAP3K9P80192 1104 aa25.19■■□□□ 1.62
CCDC12-207ENST00000494655 MKRN3Q13064 507 aaKnown RBP25.19■■□□□ 1.62
CCDC12-207ENST00000494655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.19■■□□□ 1.62
CCDC12-207ENST00000494655 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
CCDC12-207ENST00000494655 HAUS7Q99871 368 aa25.19■■□□□ 1.62
CCDC12-207ENST00000494655 CDK5RAP2Q96SN8 1893 aa25.19■■□□□ 1.62
CCDC12-207ENST00000494655 LAMB1P07942 1786 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 PPP4CP60510 307 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 VGLL4Q14135 290 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 SPRYD7Q5W111 196 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 SH3RF3Q8TEJ3 882 aaPredicted RBP25.18■■□□□ 1.62
CCDC12-207ENST00000494655 WNK4Q96J92 1243 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 ZIC5Q96T25 663 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 ELP3Q9H9T3 547 aa25.18■■□□□ 1.62
CCDC12-207ENST00000494655 SLC9C2Q5TAH2 1124 aa25.17■■□□□ 1.62
CCDC12-207ENST00000494655 MIGA2Q7L4E1 593 aa25.17■■□□□ 1.62
CCDC12-207ENST00000494655 ADGRA1Q86SQ6 560 aa25.17■■□□□ 1.62
CCDC12-207ENST00000494655 DDX4Q9NQI0 724 aaKnown RBP25.17■■□□□ 1.62
CCDC12-207ENST00000494655 ATRNL1Q5VV63 1379 aa25.17■■□□□ 1.62
CCDC12-207ENST00000494655 MANSC4A6NHS7 340 aaPredicted RBP25.16■■□□□ 1.62
CCDC12-207ENST00000494655 ERC2O15083 957 aa25.16■■□□□ 1.62
CCDC12-207ENST00000494655 OSBPL5Q9H0X9 879 aaPredicted RBP25.16■■□□□ 1.62
CCDC12-207ENST00000494655 SAGE1Q9NXZ1 904 aa25.16■■□□□ 1.62
CCDC12-207ENST00000494655 TTC41PQ6P2S7 1318 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 PDE6AP16499 860 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 ANKRD45Q5TZF3 282 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 ZSCAN25Q6NSZ9 544 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.15■■□□□ 1.62
CCDC12-207ENST00000494655 ZFPM1Q8IX07 1006 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 MIGA1Q8NAN2 632 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 OPTNQ96CV9 577 aa25.15■■□□□ 1.62
CCDC12-207ENST00000494655 DHX36Q9H2U1 1008 aaKnown RBP25.14■■□□□ 1.62
CCDC12-207ENST00000494655 USP5P45974 858 aa25.13■■□□□ 1.61
CCDC12-207ENST00000494655 INHBEP58166 350 aa25.13■■□□□ 1.61
CCDC12-207ENST00000494655 TGFBRAP1Q8WUH2 860 aa25.13■■□□□ 1.61
CCDC12-207ENST00000494655 FLT1P17948 1338 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 ZNF532Q9HCE3 1301 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 MAGEB6P1A0A0J9YX57 407 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 DDTLA6NHG4 134 aaPredicted RBP25.12■■□□□ 1.61
CCDC12-207ENST00000494655 HSPA8P11142 646 aaKnown RBP25.12■■□□□ 1.61
CCDC12-207ENST00000494655 MX1P20591 662 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 LBX1P52954 281 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 MAPKAPK5Q8IW41 473 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 ZKSCAN4Q969J2 545 aaPredicted RBP25.12■■□□□ 1.61
CCDC12-207ENST00000494655 EDC3Q96F86 508 aaKnown RBP25.12■■□□□ 1.61
CCDC12-207ENST00000494655 OTUD5Q96G74 571 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 TRIM34Q9BYJ4 488 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 DOCK1Q14185 1865 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 NAV1Q8NEY1 1877 aa25.12■■□□□ 1.61
CCDC12-207ENST00000494655 SPDYE5A6NIY4 337 aa25.11■■□□□ 1.61
CCDC12-207ENST00000494655 DYNLL1P63167 89 aaKnown RBP25.11■■□□□ 1.61
CCDC12-207ENST00000494655 LRRFIP1Q32MZ4 808 aaKnown RBP25.11■■□□□ 1.61
CCDC12-207ENST00000494655 SH3BP5LQ7L8J4 393 aa25.11■■□□□ 1.61
CCDC12-207ENST00000494655 ERO1BQ86YB8 467 aa25.11■■□□□ 1.61
CCDC12-207ENST00000494655 PRDM10Q9NQV6 1147 aa25.11■■□□□ 1.61
CCDC12-207ENST00000494655 SNCAIPQ9Y6H5 919 aa25.11■■□□□ 1.61
CCDC12-207ENST00000494655 MYH1P12882 1939 aa25.1■■□□□ 1.61
CCDC12-207ENST00000494655 GLRX3O76003 335 aaKnown RBP25.1■■□□□ 1.61
CCDC12-207ENST00000494655 ALDH1A1P00352 501 aa25.1■■□□□ 1.61
CCDC12-207ENST00000494655 HLA-DOAP06340 250 aa25.1■■□□□ 1.61
CCDC12-207ENST00000494655 OTUD7BQ6GQQ9 843 aa25.1■■□□□ 1.61
CCDC12-207ENST00000494655 CRNKL1Q9BZJ0 848 aaKnown RBP25.1■■□□□ 1.61
CCDC12-207ENST00000494655 PICK1Q9NRD5 415 aa25.1■■□□□ 1.61
CCDC12-207ENST00000494655 TRPA1O75762 1119 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 TM4SF4P48230 202 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 IRX6P78412 446 aaPredicted RBP25.09■■□□□ 1.61
CCDC12-207ENST00000494655 TSHZ3Q63HK5 1081 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.09■■□□□ 1.61
CCDC12-207ENST00000494655 RNF186Q9NXI6 227 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 HERC5Q9UII4 1024 aaKnown RBP25.09■■□□□ 1.61
CCDC12-207ENST00000494655 TSKSQ9UJT2 592 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 ZNF112Q9UJU3 913 aa25.09■■□□□ 1.61
CCDC12-207ENST00000494655 INPP5BP32019 993 aa25.08■■□□□ 1.61
CCDC12-207ENST00000494655 ADD2P35612 726 aa25.08■■□□□ 1.61
CCDC12-207ENST00000494655 GTF2A2P52657 109 aa25.08■■□□□ 1.61
CCDC12-207ENST00000494655 NOL9Q5SY16 702 aaKnown RBP25.08■■□□□ 1.61
CCDC12-207ENST00000494655 CRACR2BQ8N4Y2 399 aaPredicted RBP25.08■■□□□ 1.61
CCDC12-207ENST00000494655 TBC1D12O60347 775 aa25.07■■□□□ 1.6
CCDC12-207ENST00000494655 PPATQ06203 517 aa25.07■■□□□ 1.6
CCDC12-207ENST00000494655 PPIL2Q13356 520 aa25.07■■□□□ 1.6
CCDC12-207ENST00000494655 SCYL3Q8IZE3 742 aa25.07■■□□□ 1.6
CCDC12-207ENST00000494655 UBE3CQ15386 1083 aa25.06■■□□□ 1.6
CCDC12-207ENST00000494655 SMC5Q8IY18 1101 aa25.06■■□□□ 1.6
CCDC12-207ENST00000494655 KBTBD3Q8NAB2 608 aa25.06■■□□□ 1.6
CCDC12-207ENST00000494655 RIOK1Q9BRS2 568 aaKnown RBP25.06■■□□□ 1.6
CCDC12-207ENST00000494655 SAP30BPQ9UHR5 308 aaKnown RBP25.06■■□□□ 1.6
CCDC12-207ENST00000494655 ATAD5Q96QE3 1844 aa25.06■■□□□ 1.6
CCDC12-207ENST00000494655 TCRBV5S4A2TA0A5A2 114 aa25.05■■□□□ 1.6
CCDC12-207ENST00000494655 CTNND1O60716 968 aaKnown RBP25.05■■□□□ 1.6
CCDC12-207ENST00000494655 GJA5P36382 358 aa25.05■■□□□ 1.6
CCDC12-207ENST00000494655 MAP3K10Q02779 954 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms