RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ZNF862O60290 1169 aa7.74□□□□□ -1.17
SMC4-224ENST00000494612 FAM84AQ96KN4 292 aa7.74□□□□□ -1.17
SMC4-224ENST00000494612 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
SMC4-224ENST00000494612 NIF3L1Q9GZT8 377 aa7.74□□□□□ -1.17
SMC4-224ENST00000494612 DISC1Q9NRI5 854 aa7.74□□□□□ -1.17
SMC4-224ENST00000494612 ZNF865P0CJ78 1059 aaPredicted RBP7.73□□□□□ -1.17
SMC4-224ENST00000494612 GRM2Q14416 872 aa7.73□□□□□ -1.17
SMC4-224ENST00000494612 KIF4BQ2VIQ3 1234 aa7.73□□□□□ -1.17
SMC4-224ENST00000494612 CYP27C1Q4G0S4 372 aa7.73□□□□□ -1.17
SMC4-224ENST00000494612 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 FUT4P22083 530 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 ZNF157P51786 506 aaPredicted RBP7.72□□□□□ -1.17
SMC4-224ENST00000494612 BNIP3Q12983 259 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 CDK5R2Q13319 367 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 BHLHE22Q8NFJ8 381 aaPredicted RBP7.72□□□□□ -1.17
SMC4-224ENST00000494612 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
SMC4-224ENST00000494612 TOX2Q96NM4 488 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 KRT82Q9NSB4 513 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
SMC4-224ENST00000494612 GADD45BO75293 160 aaPredicted RBP7.71□□□□□ -1.18
SMC4-224ENST00000494612 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
SMC4-224ENST00000494612 FAM87AP0C7U9 286 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 ID3Q02535 119 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 PI4K2BQ8TCG2 481 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
SMC4-224ENST00000494612 CSRNP1Q96S65 589 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
SMC4-224ENST00000494612 ATXN3LQ9H3M9 355 aa7.71□□□□□ -1.18
SMC4-224ENST00000494612 RNASE1P07998 156 aaKnown RBP7.7□□□□□ -1.18
SMC4-224ENST00000494612 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
SMC4-224ENST00000494612 PLD6Q8N2A8 252 aaKnown RBP7.7□□□□□ -1.18
SMC4-224ENST00000494612 U3KQE9 123 aa7.7□□□□□ -1.18
SMC4-224ENST00000494612 LRRC10BA6NIK2 292 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 CD8BP10966 210 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 MAPK1P28482 360 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 LILRA6Q6PI73 481 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 FAM181AQ8N9Y4 354 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 ZSCAN18Q8TBC5 510 aaPredicted RBP7.69□□□□□ -1.18
SMC4-224ENST00000494612 NETO1Q8TDF5 533 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 RBCK1Q9BYM8 510 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 PIDD1Q9HB75 910 aa7.69□□□□□ -1.18
SMC4-224ENST00000494612 MBNL3Q9NUK0 354 aaKnown RBP7.69□□□□□ -1.18
SMC4-224ENST00000494612 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 TTLL4Q14679 1199 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 TMEM39AQ9NV64 488 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 FAM53CQ9NYF3 392 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
SMC4-224ENST00000494612 LEFTY1O75610 366 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 MESP2Q0VG99 397 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 LRRN4CLQ8ND94 238 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 TMC1Q8TDI8 760 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 STK35Q8TDR2 534 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 DUSP23Q9BVJ7 150 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 MKNK2Q9HBH9 465 aa7.67□□□□□ -1.18
SMC4-224ENST00000494612 PRRG2O14669 202 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 NEFMP07197 916 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 FCGRTP55899 365 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 PRKCQQ04759 706 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 PPP2R3AQ06190 1150 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 ZC3H12AQ5D1E8 599 aaKnown RBP7.66□□□□□ -1.18
SMC4-224ENST00000494612 PI16Q6UXB8 463 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 DTHD1Q6ZMT9 781 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 ADAMTS6Q9UKP5 1117 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 PCOLCE2Q9UKZ9 415 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 NCANO14594 1321 aa7.66□□□□□ -1.18
SMC4-224ENST00000494612 XRCC5P13010 732 aaKnown RBP7.65□□□□□ -1.18
SMC4-224ENST00000494612 HCLS1P14317 486 aaPredicted RBP7.65□□□□□ -1.18
SMC4-224ENST00000494612 OXCT1P55809 520 aa7.65□□□□□ -1.18
SMC4-224ENST00000494612 CACNA2D2Q9NY47 1150 aa7.65□□□□□ -1.18
SMC4-224ENST00000494612 PLAGL2Q9UPG8 496 aa7.65□□□□□ -1.18
SMC4-224ENST00000494612 B8ZZF3 427 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 ARNTP27540 789 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 CFPP27918 469 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 IFI16Q16666 785 aaKnown RBP7.64□□□□□ -1.19
SMC4-224ENST00000494612 FAM214BQ7L5A3 538 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 KCNB2Q92953 911 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 ISL2Q96A47 359 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 ZNF428Q96B54 188 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 PPP1R16BQ96T49 567 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 BCO2Q9BYV7 579 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 PPP4R2Q9NY27 417 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 DCTN4Q9UJW0 460 aa7.64□□□□□ -1.19
SMC4-224ENST00000494612 ANKRD33BA6NCL7 494 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 RNGTTO60942 597 aaKnown RBP7.63□□□□□ -1.19
SMC4-224ENST00000494612 CD96P40200 585 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 ERVK-24P63145 666 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 MLANAQ16655 118 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 ARHGAP27Q6ZUM4 889 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 TMC7Q7Z402 723 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 ZSWIM9Q86XI8 627 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 SULF2Q8IWU5 870 aa7.63□□□□□ -1.19
SMC4-224ENST00000494612 GPN3Q9UHW5 284 aaPredicted RBP7.63□□□□□ -1.19
SMC4-224ENST00000494612 HNRNPUQ00839 825 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMC4-224ENST00000494612 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 DSC3Q14574 896 aa7.62□□□□□ -1.19
SMC4-224ENST00000494612 KCNMB1Q16558 191 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms