RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	THUMPD2	Q9BTF0	503 aa	Known RBP	9.42	□□□□□ -0.9
KATNA1-208	ENST00000494504	MXD3	Q9BW11	206 aa		9.42	□□□□□ -0.9
KATNA1-208	ENST00000494504	TRMT112	Q9UI30	125 aa	Known RBP	9.42	□□□□□ -0.9
KATNA1-208	ENST00000494504	NUP98	P52948	1817 aa		9.42	□□□□□ -0.9
KATNA1-208	ENST00000494504	SIPA1L3	O60292	1781 aa	Predicted RBP	9.42	□□□□□ -0.9
KATNA1-208	ENST00000494504	TAF1	P21675	1872 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	ZBTB48	P10074	688 aa	Predicted RBP	9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	GJA5	P36382	358 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	PTPRN	Q16849	979 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	TMC4	Q7Z404	712 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	RTF1	Q92541	710 aa	Known RBP	9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	FAM161B	Q96MY7	647 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	GML	Q99445	158 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	PCDHGC3	Q9UN70	934 aa		9.41	□□□□□ -0.9
KATNA1-208	ENST00000494504	WNT10B	O00744	389 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	TRIM66	O15016	1216 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	UFL1	O94874	794 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	FARP2	O94887	1054 aa	Predicted RBP	9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	GMPR	P36959	345 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	CNGB1	Q14028	1251 aa	Predicted RBP	9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	TAF1C	Q15572	869 aa	Predicted RBP	9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	UBE2Q1	Q7Z7E8	422 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	FAM122A	Q96E09	287 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	UNC93B1	Q9H1C4	597 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	BIN2	Q9UBW5	565 aa	Predicted RBP	9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	KNSTRN	Q9Y448	316 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	SCN9A	Q15858	1988 aa		9.4	□□□□□ -0.9
KATNA1-208	ENST00000494504	RPTOR	Q8N122	1335 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	TTC28	Q96AY4	2481 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	CCL5	P13501	91 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	PLA2G5	P39877	138 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	RNF208	Q9H0X6	261 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	ANKIB1	Q9P2G1	1089 aa		9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	9.39	□□□□□ -0.91
KATNA1-208	ENST00000494504	IRS2	Q9Y4H2	1338 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	USP17L3	A6NCW0	530 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	USP17L4	A6NCW7	530 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	ANXA1	P04083	346 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	PRKAR2B	P31323	418 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	GJA8	P48165	433 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	KIF22	Q14807	665 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	LINC01559	Q495D7	138 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	RTL5	Q5HYW3	569 aa	Predicted RBP	9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	USP17L1	Q7RTZ2	530 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	NLRP10	Q86W26	655 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	OGFOD1	Q8N543	542 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	ELP3	Q9H9T3	547 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZFYVE28	Q9HCC9	887 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	EVA1B	Q9NVM1	165 aa		9.38	□□□□□ -0.91
KATNA1-208	ENST00000494504	SH3TC1	Q8TE82	1336 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	PPP1R12B	O60237	982 aa	Predicted RBP	9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	GJB1	P08034	283 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	SYN1	P17600	705 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	TAF7	Q15545	349 aa	Predicted RBP	9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	APOBEC3F	Q8IUX4	373 aa	Known RBP	9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	C7orf61	Q8IZ16	206 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZSCAN1	Q8NBB4	408 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	U2AF1L4	Q8WU68	220 aa	Known RBP	9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	SPIRE2	Q8WWL2	714 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	BAP1	Q92560	729 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	GUCD1	Q96NT3	240 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	GDF15	Q99988	308 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	GGA1	Q9UJY5	639 aa		9.37	□□□□□ -0.91
KATNA1-208	ENST00000494504	TMEM265	A0A087WTH1	108 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	CCL15-CCL14	A0A0B4J2E2	113 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504		H3BM21	787 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	SSTR3	P32745	418 aa	Predicted RBP	9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	RPS8	P62241	208 aa	Known RBP	9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	KCNH2	Q12809	1159 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	AIMP1	Q12904	312 aa	Known RBP	9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	CCL15	Q16663	113 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	AMHR2	Q16671	573 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	LRIT3	Q3SXY7	679 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	FAM43A	Q8N2R8	423 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	PRR7	Q8TB68	274 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	RAET1E	Q8TD07	263 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	BRI3BP	Q8WY22	251 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	OPTN	Q96CV9	577 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZFP42	Q96MM3	310 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	DEFB129	Q9H1M3	183 aa		9.36	□□□□□ -0.91
KATNA1-208	ENST00000494504	KDM3B	Q7LBC6	1761 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	TFRC	P02786	760 aa	Known RBP	9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	NDUFV2	P19404	249 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	EIF2S2	P20042	333 aa	Known RBP	9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	VARS	P26640	1264 aa	Known RBP	9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	GRK4	P32298	578 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	BMP8B	P34820	402 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	LACTB	P83111	547 aa	Predicted RBP	9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	PDE4D	Q08499	809 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	NNT	Q13423	1086 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	PROSER3	Q2NL68	480 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	TDH	Q8IZJ6	230 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZNF511	Q8NB15	262 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	FAM89A	Q96GI7	184 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	RIPOR2	Q9Y4F9	1068 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	ZSWIM8	A7E2V4	1837 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	COL4A1	P02462	1669 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	LAMB2	P55268	1798 aa		9.35	□□□□□ -0.91
KATNA1-208	ENST00000494504	EYS	Q5T1H1	3165 aa		9.34	□□□□□ -0.91
KATNA1-208	ENST00000494504	MOXD2P	A6NHM9	499 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms