RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CA8P35219 290 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 ARFGAP2Q8N6H7 521 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 ARHGEF10LQ9HCE6 1279 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 GCKRQ14397 625 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 JAKMIP2Q96AA8 810 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 SLC52A2Q9HAB3 445 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 HIBADHP31937 336 aaKnown RBP21.48■■□□□ 1.03
COL27A1-207ENST00000494090 CCT6AP40227 531 aaKnown RBP21.48■■□□□ 1.03
COL27A1-207ENST00000494090 PDE8AO60658 829 aa21.48■■□□□ 1.03
COL27A1-207ENST00000494090 VWA3BQ502W6 1294 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 ATP6V0A2Q9Y487 856 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 ATP2C2O75185 946 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 CCDC14Q49A88 953 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 NOC4LQ9BVI4 516 aaKnown RBP21.47■■□□□ 1.03
COL27A1-207ENST00000494090 ARMT1Q9H993 441 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 MTUS1Q9ULD2 1270 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 ZNF202O95125 648 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 PLCB3Q01970 1234 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 PPP2R5BQ15173 497 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 HAUS3Q68CZ6 603 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 CDC37L1Q7L3B6 337 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 DIS3L2Q8IYB7 885 aaKnown RBP21.47■■□□□ 1.03
COL27A1-207ENST00000494090 EBAG9O00559 213 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 TERF1P54274 439 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 MRPS9P82933 396 aaKnown RBP21.47■■□□□ 1.03
COL27A1-207ENST00000494090 RBM26Q5T8P6 1007 aaKnown RBP21.47■■□□□ 1.03
COL27A1-207ENST00000494090 CYP26C1Q6V0L0 522 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 PSMD1Q99460 953 aa21.47■■□□□ 1.03
COL27A1-207ENST00000494090 MTRF1LQ9UGC7 380 aaKnown RBP21.47■■□□□ 1.03
COL27A1-207ENST00000494090 ANKS4BQ8N8V4 417 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 LETM2Q2VYF4 491 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 RAB3IL1Q8TBN0 382 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 NAPGQ99747 312 aaPredicted RBP21.46■■□□□ 1.03
COL27A1-207ENST00000494090 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 CCDC50Q8IVM0 306 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 SPATA31E1Q6ZUB1 1445 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 GCC2Q8IWJ2 1684 aa21.46■■□□□ 1.03
COL27A1-207ENST00000494090 OTUD6BQ8N6M0 293 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 RIOK3O14730 519 aaKnown RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 EPB41P11171 864 aaKnown RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 BRDTQ58F21 947 aaPredicted RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 CNNM4Q6P4Q7 775 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 SPATA24Q86W54 205 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 MYRIPQ8NFW9 859 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 IFT81Q8WYA0 676 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 DSCC1Q9BVC3 393 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 POLR2DO15514 142 aaKnown RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 UFL1O94874 794 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 ATP5JP18859 108 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 SMTNP53814 917 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 FAM212AQ96EL1 285 aa21.45■■□□□ 1.02
COL27A1-207ENST00000494090 V9GY48 417 aaPredicted RBP21.45■■□□□ 1.02
COL27A1-207ENST00000494090 GSPT1P15170 499 aaKnown RBP21.44■■□□□ 1.02
COL27A1-207ENST00000494090 CCDC117Q8IWD4 279 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-207ENST00000494090 KIFAP3Q92845 792 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 PICK1Q9NRD5 415 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 TMOD4Q9NZQ9 345 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 GGA1Q9UJY5 639 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 SYNRGQ9UMZ2 1314 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 PDE4DQ08499 809 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 PIK3AP1Q6ZUJ8 805 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 VPS16Q9H269 839 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 BTG4Q9NY30 223 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 WDR44Q5JSH3 913 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 ZNF594Q96JF6 807 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-207ENST00000494090 CCNL1Q9UK58 526 aaPredicted RBP21.44■■□□□ 1.02
COL27A1-207ENST00000494090 TMEM110-MUSTN1A8MSY1 372 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 NDC80O14777 642 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 TXNDC16Q9P2K2 825 aa21.44■■□□□ 1.02
COL27A1-207ENST00000494090 TRAF5O00463 557 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 CEP128Q6ZU80 1094 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 FAM76AQ8TAV0 307 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 PPP1R9BQ96SB3 815 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 TMEM63CQ9P1W3 806 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 GJC1P36383 396 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 OTUD7BQ6GQQ9 843 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 CCDC121Q6ZUS5 278 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
COL27A1-207ENST00000494090 CFAP58Q5T655 872 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 SUPT20HQ8NEM7 779 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 SSH3Q8TE77 659 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 TAF12Q16514 161 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 TTC38Q5R3I4 469 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 KRT40Q6A162 431 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 PAIP2Q9BPZ3 127 aaKnown RBP21.43■■□□□ 1.02
COL27A1-207ENST00000494090 CSRNP2Q9H175 543 aa21.43■■□□□ 1.02
COL27A1-207ENST00000494090 PDE6BP35913 854 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 FNBP1Q96RU3 617 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 EXOC7Q9UPT5 735 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 LPIN2Q92539 896 aa21.42■■□□□ 1.02
COL27A1-207ENST00000494090 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
COL27A1-207ENST00000494090 ARL1P40616 181 aaPredicted RBP21.42■■□□□ 1.02
COL27A1-207ENST00000494090 SLC8A3P57103 927 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms