RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 NOL10Q9BSC4 688 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 NDUFB9Q9Y6M9 179 aa12.69□□□□□ -0.38
TRAPPC12-222ENST00000493792 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 H0YGN5 161 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 ZBTB22O15209 634 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 PPP1R12BO60237 982 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 USP2O75604 605 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 IDH1O75874 414 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 BTDP43251 543 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 TCP10Q12799 353 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 NBPF12Q5TAG4 269 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 TMEM39BQ9GZU3 492 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 SSC5DA1L4H1 1573 aa12.68□□□□□ -0.38
TRAPPC12-222ENST00000493792 RANBP2P49792 3224 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
TRAPPC12-222ENST00000493792 PICALMQ13492 652 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 AAMPQ13685 434 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 NSUN4Q96CB9 384 aaKnown RBP12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 GPATCH3Q96I76 525 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
TRAPPC12-222ENST00000493792 GAKO14976 1311 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 GOLIM4O00461 696 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 CYP7A1P22680 504 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 IREB2P48200 963 aaKnown RBP12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 TTF1Q15361 905 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 ANKRD45Q5TZF3 282 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 OTUD7BQ6GQQ9 843 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 ZNF384Q8TF68 577 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
TRAPPC12-222ENST00000493792 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 BAG3O95817 575 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 RGS3P49796 1198 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 NFIAQ12857 509 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 FAM83AQ86UY5 434 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 ANKRD13AQ8IZ07 590 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 CEP290O15078 2479 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
TRAPPC12-222ENST00000493792 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 GPR75-ASB3A0A0A6YYF3 556 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 ATP5JP18859 108 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 TSHZ3Q63HK5 1081 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 PAG1Q9NWQ8 432 aa12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-222ENST00000493792 DLL1O00548 723 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 PLCG2P16885 1265 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 SLC9C1Q4G0N8 1177 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 DCAF15Q66K64 600 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 BRI3BPQ8WY22 251 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 FAM198AQ9UFP1 575 aa12.62□□□□□ -0.39
TRAPPC12-222ENST00000493792 ENTPD3O75355 529 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 RHBDL3P58872 404 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 DYNLL1P63167 89 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 ZFPM1Q8IX07 1006 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 HAUS7Q99871 368 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 IDI2Q9BXS1 227 aa12.61□□□□□ -0.39
TRAPPC12-222ENST00000493792 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-222ENST00000493792 COL6A3P12111 3177 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms