RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 PRMT6Q96LA8 375 aaPredicted RBP14.87□□□□□ -0.03
SNX17-208ENST00000493711 SEC62Q99442 399 aaKnown RBP14.87□□□□□ -0.03
SNX17-208ENST00000493711 DSCC1Q9BVC3 393 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 CTNNA3Q9UI47 895 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 SLC4A4Q9Y6R1 1079 aa14.87□□□□□ -0.03
SNX17-208ENST00000493711 ENTPD3O75355 529 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 USP5P45974 858 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 TNNI2P48788 182 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 DYNLL1P63167 89 aaKnown RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 ALX1Q15699 326 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 SLFNL1Q499Z3 407 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 C8orf34Q49A92 452 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 TBC1D10BQ4KMP7 808 aaPredicted RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 RBM26Q5T8P6 1007 aaKnown RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 SAMD7Q7Z3H4 446 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 AMOTL1Q8IY63 956 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 RBM46Q8TBY0 533 aaKnown RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 SH3RF3Q8TEJ3 882 aaPredicted RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 TAF1DQ9H5J8 278 aaPredicted RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 NMRK2Q9NPI5 230 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 ZNF70Q9UC06 446 aaPredicted RBP14.86□□□□□ -0.03
SNX17-208ENST00000493711 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 PSME4Q14997 1843 aa14.86□□□□□ -0.03
SNX17-208ENST00000493711 MAST2Q6P0Q8 1798 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 CHGBP05060 677 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 APPP05067 770 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 HTRA3P83110 453 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
SNX17-208ENST00000493711 APOBEC3FQ8IUX4 373 aaKnown RBP14.85□□□□□ -0.03
SNX17-208ENST00000493711 TDRD3Q9H7E2 651 aaKnown RBP14.85□□□□□ -0.03
SNX17-208ENST00000493711 ANO2Q9NQ90 1003 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 ZMYM6O95789 1325 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 PITPNM2Q9BZ72 1349 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
SNX17-208ENST00000493711 SHTN1A0MZ66 631 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 GSG1L2A8MUP6 293 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 HSPD1P10809 573 aaKnown RBP14.84□□□□□ -0.03
SNX17-208ENST00000493711 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 CCDC129Q6ZRS4 1044 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 FAM83AQ86UY5 434 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 DHX36Q9H2U1 1008 aaKnown RBP14.84□□□□□ -0.03
SNX17-208ENST00000493711 UPF2Q9HAU5 1272 aaKnown RBP14.84□□□□□ -0.03
SNX17-208ENST00000493711 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 MYH13Q9UKX3 1938 aa14.84□□□□□ -0.03
SNX17-208ENST00000493711 WDHD1O75717 1129 aaPredicted RBP14.83□□□□□ -0.04
SNX17-208ENST00000493711 TRPM4Q8TD43 1214 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 TGFBRAP1Q8WUH2 860 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 MAP4K1Q92918 833 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 DCPSQ96C86 337 aaKnown RBP14.83□□□□□ -0.04
SNX17-208ENST00000493711 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 NAPBQ9H115 298 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.04
SNX17-208ENST00000493711 PGAP2Q9UHJ9 254 aa14.83□□□□□ -0.04
SNX17-208ENST00000493711 POTECB2RU33 542 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 MCCP23508 829 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 TDO2P48775 406 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 FSTL1Q12841 308 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 SBK1Q52WX2 424 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 FAM151AQ8WW52 585 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 LSG1Q9H089 658 aaKnown RBP14.82□□□□□ -0.04
SNX17-208ENST00000493711 RRAGCQ9HB90 399 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 VEZTQ9HBM0 779 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
SNX17-208ENST00000493711 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 WDR90Q96KV7 1748 aa14.82□□□□□ -0.04
SNX17-208ENST00000493711 ZNF646O15015 1829 aaPredicted RBP14.82□□□□□ -0.04
SNX17-208ENST00000493711 CLRN2A0PK11 232 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 PRKAB2O43741 272 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 EGFRP00533 1210 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 HIRAP54198 1017 aaPredicted RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 ANGEL2Q5VTE6 544 aaKnown RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 RNF20Q5VTR2 975 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 BACH2Q9BYV9 841 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 OSBPL5Q9H0X9 879 aaPredicted RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 MCM9Q9NXL9 1143 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 MKRN1Q9UHC7 482 aaKnown RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 FLT1P17948 1338 aa14.81□□□□□ -0.04
SNX17-208ENST00000493711 COL2A1P02458 1487 aaPredicted RBP14.81□□□□□ -0.04
SNX17-208ENST00000493711 TCP10L2B9ZVM9 353 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 FGAP02671 866 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 HLA-DOAP06340 250 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 NT5C2P49902 561 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 PICALMQ13492 652 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 IMMTQ16891 758 aaKnown RBP14.8□□□□□ -0.04
SNX17-208ENST00000493711 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
SNX17-208ENST00000493711 VPS53Q5VIR6 699 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 LDHDQ86WU2 507 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 MAPKAPK5Q8IW41 473 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 SULF1Q8IWU6 871 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 IL25Q9H293 177 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 ZNF287Q9HBT7 754 aa14.8□□□□□ -0.04
SNX17-208ENST00000493711 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms