RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.61
NFIA-213ENST00000493627 MROH7-TTC4A0A0A0MT08 1334 aa11.27□□□□□ -0.61
NFIA-213ENST00000493627 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 PDHXO00330 501 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 MECOMQ03112 1051 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 ERICH6Q7L0X2 663 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 ZSCAN29Q8IWY8 852 aaPredicted RBP11.26□□□□□ -0.61
NFIA-213ENST00000493627 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 FAM163AQ96GL9 167 aaPredicted RBP11.26□□□□□ -0.61
NFIA-213ENST00000493627 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 ADGRA2Q96PE1 1338 aa11.26□□□□□ -0.61
NFIA-213ENST00000493627 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 PHF20L1A8MW92 1017 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 PICALMQ13492 652 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 MOGSQ13724 837 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 PI16Q6UXB8 463 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 SPATA5Q8NB90 893 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 PARK7Q99497 189 aaKnown RBP11.25□□□□□ -0.61
NFIA-213ENST00000493627 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
NFIA-213ENST00000493627 PICK1Q9NRD5 415 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 HMG20BQ9P0W2 317 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 CPA4Q9UI42 421 aa11.25□□□□□ -0.61
NFIA-213ENST00000493627 GPR75-ASB3A0A0A6YYF3 556 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 DDTLA6NHG4 134 aaPredicted RBP11.24□□□□□ -0.61
NFIA-213ENST00000493627 CXCL11O14625 94 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
NFIA-213ENST00000493627 GNRH1P01148 92 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
NFIA-213ENST00000493627 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
NFIA-213ENST00000493627 RHBDL3P58872 404 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.61
NFIA-213ENST00000493627 ZKSCAN2Q63HK3 967 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 NBPF11Q86T75 865 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 ZNF384Q8TF68 577 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 ZHX2Q9Y6X8 837 aa11.24□□□□□ -0.61
NFIA-213ENST00000493627 A0A0G2JLL6 359 aaPredicted RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 MYCP01106 439 aaPredicted RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 PTPRAP18433 802 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 CTGFP29279 349 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 MCAMP43121 646 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 PRMT2P55345 433 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 GSTO1P78417 241 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 PRRT2Q7Z6L0 340 aaPredicted RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 SH3TC2Q8TF17 1288 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 NSUN4Q96CB9 384 aaKnown RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 RAI14Q9P0K7 980 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 COL2A1P02458 1487 aaPredicted RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 MAST2Q6P0Q8 1798 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
NFIA-213ENST00000493627 KIAA0100Q14667 2235 aaKnown RBP11.23□□□□□ -0.61
NFIA-213ENST00000493627 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
NFIA-213ENST00000493627 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 CYP2C8P10632 490 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 PSMC4P43686 418 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 HNRNPUQ00839 825 aaKnown RBP eCLIP11.22□□□□□ -0.61
NFIA-213ENST00000493627 POLA2Q14181 598 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 FASTKD5Q7L8L6 764 aaKnown RBP11.22□□□□□ -0.61
NFIA-213ENST00000493627 SRRDQ9UH36 339 aa11.22□□□□□ -0.61
NFIA-213ENST00000493627 MYPNQ86TC9 1320 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 TRIM75PA6NK02 468 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 FMNL1O95466 1100 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 LDHCP07864 332 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 BCRP11274 1271 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 OSBPP22059 807 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 GADL1Q6ZQY3 521 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 FTSJ3Q8IY81 847 aaKnown RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 OSBPL5Q9H0X9 879 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 LRP2BPQ9P2M1 347 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.21□□□□□ -0.61
NFIA-213ENST00000493627 AFG3L2Q9Y4W6 797 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
NFIA-213ENST00000493627 TBC1D12O60347 775 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 HOXD10P28358 340 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 FCGRTP55899 365 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 SSH3Q8TE77 659 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
NFIA-213ENST00000493627 GPR108Q9NPR9 543 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms