RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 NCOA7Q8NI08 942 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 TGFBRAP1Q8WUH2 860 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 ANAPC4Q9UJX5 808 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 MYH1P12882 1939 aa16.67■□□□□ 0.26
PDZRN3-210ENST00000492909 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 USP17L12C9JPN9 530 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 USP17L21D6R901 530 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 YY1P25490 414 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 RBM5P52756 815 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 COL9A3Q14050 684 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 AGBL3Q8NEM8 1001 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 GMLQ99445 158 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 MCM9Q9NXL9 1143 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 TNIP1Q15025 636 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 SBK1Q52WX2 424 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 AKNAD1Q5T1N1 836 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 APOBEC3HQ6NTF7 200 aaKnown RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 MFSD6Q6ZSS7 791 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 RNF41Q9H4P4 317 aaPredicted RBP16.66■□□□□ 0.26
PDZRN3-210ENST00000492909 FZD9O00144 591 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 OGFOD1Q8N543 542 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 CNNM2Q9H8M5 875 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 USP40Q9NVE5 1235 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 HDAC9Q9UKV0 1011 aa16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
PDZRN3-210ENST00000492909 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 MAPKAPK5Q8IW41 473 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 FLT1P17948 1338 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 NEDD4P46934 1319 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 CYP2D7A0A087X1C5 515 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 MCM5P33992 734 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 KRT23Q9C075 422 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 LIMCH1Q9UPQ0 1083 aa16.64■□□□□ 0.25
PDZRN3-210ENST00000492909 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 USP17L8P0C7I0 530 aa16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 FGD1P98174 961 aa16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 Q6ZUG5 572 aa16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 TMX3Q96JJ7 454 aa16.63■□□□□ 0.25
PDZRN3-210ENST00000492909 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 B4E1Z4 1266 aa16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 DDNO94850 711 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 C12orf60Q5U649 245 aa16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
PDZRN3-210ENST00000492909 PRC1O43663 620 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 CYP2D6P10635 497 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 STK11IPQ8N1F8 1099 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 GJA3Q9Y6H8 435 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 SMIM22K7EJ46 135 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 MMP14P50281 582 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 PICALMQ13492 652 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
PDZRN3-210ENST00000492909 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 KDM4AO75164 1064 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 FGRP09769 529 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 ANTXR2P58335 489 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 PDE4BQ07343 736 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 SLC4A8Q2Y0W8 1093 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 FBXL16Q8N461 479 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 ESR2Q92731 530 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 BRF1Q92994 677 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 AGXT2Q9BYV1 514 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 DDX4Q9NQI0 724 aaKnown RBP16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 ROBO3Q96MS0 1386 aa16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
PDZRN3-210ENST00000492909 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
PDZRN3-210ENST00000492909 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms