RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 FBXO38Q6PIJ6 1188 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 ZNF589Q86UQ0 364 aaPredicted RBP23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 RABGGTAQ92696 567 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 CCDC51Q96ER9 411 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 CYP21A2P08686 494 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 KRT9P35527 623 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 ARFGAP2Q8N6H7 521 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 DESI2Q9BSY9 194 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 IKBKBO14920 756 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 GNAQP50148 359 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 MACROD2A1Z1Q3 448 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 STX10O60499 249 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 MBD4O95243 580 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 FBXO18Q8NFZ0 1043 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 ZNF594Q96JF6 807 aaPredicted RBP23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 UBA5Q9GZZ9 404 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 VGLL3A8MV65 326 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 CFAP58Q5T655 872 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 TLR7Q9NYK1 1049 aaKnown RBP23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 WHAMMP3Q1A5X7 153 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 SELENOOQ9BVL4 669 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 SERTAD1Q9UHV2 236 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 GOLGA6CA6NDK9 693 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 GOLGA6DP0CG33 693 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 ZNF76P36508 570 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 TERF2Q15554 542 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 PLA2G4DQ86XP0 818 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 GOLGA6AQ9NYA3 693 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 E9PCH4 1651 aa23.78■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 LRRC7Q96NW7 1537 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 NF2P35240 595 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 TAOK3Q9H2K8 898 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 RBM28Q9NW13 759 aaKnown RBP23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 PAK1Q13153 545 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 DTHD1Q6ZMT9 781 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 CCDC121Q6ZUS5 278 aa23.77■■□□□ 1.4
CHKB-CPT1B-203ENST00000492556 PRPF4BQ13523 1007 aaKnown RBP23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GIGYF2Q6Y7W6 1299 aaKnown RBP23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 JAKMIP2Q96AA8 810 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SLC52A2Q9HAB3 445 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 A0A087WWV3 80 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 MAGEB6P1A0A0J9YX57 407 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 CCDC152Q4G0S7 254 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GOLGA5Q8TBA6 731 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 POLR3EQ9NVU0 708 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 TCERG1LQ5VWI1 586 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SPAG5Q96R06 1193 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SLF1Q9BQI6 1058 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 FTOQ9C0B1 505 aaKnown RBP eCLIP23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 COPRSQ9NQ92 184 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 A6NNZ2 444 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 CLCN6P51797 869 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 TUBB8Q3ZCM7 444 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 B4GALNT4Q76KP1 1039 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 IFT81Q8WYA0 676 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 MYL10Q9BUA6 226 aa23.76■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 TBC1D8BQ0IIM8 1120 aa23.75■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 ATP2C2O75185 946 aa23.75■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 KCNA6P17658 529 aa23.75■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 MIGA1Q8NAN2 632 aa23.75■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 INCENPQ9NQS7 918 aa23.75■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 PLCD3Q8N3E9 789 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 TRIML1Q8N9V2 468 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 VAT1LQ9HCJ6 419 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GOLGA6L10A0A0M3HER8 536 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 HEATR3Q7Z4Q2 680 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 TAB2Q9NYJ8 693 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 DBNLQ9UJU6 430 aaKnown RBP23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 QRICH2Q9H0J4 1663 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 CARMIL3Q8ND23 1372 aa23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SEC31AO94979 1220 aaKnown RBP23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 IQSEC3Q9UPP2 1182 aaPredicted RBP23.74■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GOLGA6BA6NDN3 693 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 ARID5BQ14865 1188 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SLC39A14Q15043 492 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 CCDC91Q7Z6B0 441 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 HELBQ8NG08 1087 aaPredicted RBP23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 KCNJ14Q9UNX9 436 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GLI2P10070 1586 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 LINC00301Q8NCQ3 95 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 ZAP70P43403 619 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 RPGRIP1Q96KN7 1286 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 STX8Q9UNK0 236 aa23.73■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 NDUFAB1O14561 156 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 SLFNL1Q499Z3 407 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 FERMT2Q96AC1 680 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 NLRP1Q9C000 1473 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 LONRF3Q496Y0 759 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 NOSTRINQ8IVI9 506 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 PPP1R2P41236 205 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 NUP58Q9BVL2 599 aa23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 GBP2P32456 591 aaPredicted RBP23.72■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 RNF17Q9BXT8 1623 aaKnown RBP23.71■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 INPP5BP32019 993 aa23.71■■□□□ 1.39
CHKB-CPT1B-203ENST00000492556 NOC4LQ9BVI4 516 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms