RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
PTPN7-215ENST00000492451 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
PTPN7-215ENST00000492451 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.276e-7■■■■□ 19.6
PTPN7-215ENST00000492451 RFX7Q2KHR2 1363 aa16.76■□□□□ 0.27
PTPN7-215ENST00000492451 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 CA12O43570 354 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
PTPN7-215ENST00000492451 TRPA1O75762 1119 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 IGHDP01880 384 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 MKRN3Q13064 507 aaKnown RBP16.75■□□□□ 0.27
PTPN7-215ENST00000492451 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 DCAF15Q66K64 600 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 TEX11Q8IYF3 940 aa16.75■□□□□ 0.27
PTPN7-215ENST00000492451 AATFQ9NY61 560 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTPN7-215ENST00000492451 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
PTPN7-215ENST00000492451 MX1P20591 662 aa16.74■□□□□ 0.27
PTPN7-215ENST00000492451 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
PTPN7-215ENST00000492451 GLRX3O76003 335 aaKnown RBP16.73■□□□□ 0.27
PTPN7-215ENST00000492451 PDE6AP16499 860 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 PICALMQ13492 652 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 ADGRA1Q86SQ6 560 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
PTPN7-215ENST00000492451 SH3RF3Q8TEJ3 882 aaPredicted RBP16.73■□□□□ 0.27
PTPN7-215ENST00000492451 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 EDC3Q96F86 508 aaKnown RBP16.73■□□□□ 0.27
PTPN7-215ENST00000492451 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
PTPN7-215ENST00000492451 ZFPM1Q8IX07 1006 aa16.72■□□□□ 0.27
PTPN7-215ENST00000492451 REM2Q8IYK8 340 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-215ENST00000492451 ZNF341Q9BYN7 854 aa16.72■□□□□ 0.27
PTPN7-215ENST00000492451 DDX4Q9NQI0 724 aaKnown RBP16.72■□□□□ 0.27
PTPN7-215ENST00000492451 COL2A1P02458 1487 aaPredicted RBP16.72■□□□□ 0.27
PTPN7-215ENST00000492451 CASP8AP2Q9UKL3 1982 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 NUCB1Q02818 461 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
PTPN7-215ENST00000492451 B4GALNT3Q6L9W6 998 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 CHD1LQ86WJ1 897 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-215ENST00000492451 SAGE1Q9NXZ1 904 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
PTPN7-215ENST00000492451 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
PTPN7-215ENST00000492451 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 MYH7P12883 1935 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 ADD2P35612 726 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 DYNLL1P63167 89 aaKnown RBP16.7■□□□□ 0.26
PTPN7-215ENST00000492451 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 KBTBD3Q8NAB2 608 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN7-215ENST00000492451 PI4K2BQ8TCG2 481 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 OTUD7AQ8TE49 926 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-215ENST00000492451 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 DHX36Q9H2U1 1008 aaKnown RBP16.7■□□□□ 0.26
PTPN7-215ENST00000492451 CSADQ9Y600 493 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
PTPN7-215ENST00000492451 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 MCOLN1Q9GZU1 580 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
PTPN7-215ENST00000492451 OTOFQ9HC10 1997 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 ZFYP08048 801 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 ZBTB48P10074 688 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 GJA5P36382 358 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 USP5P45974 858 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 TM4SF4P48230 202 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 PDE1AP54750 535 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 MAPKAPK5Q8IW41 473 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
PTPN7-215ENST00000492451 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 ZNF112Q9UJU3 913 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 FLT1P17948 1338 aa16.68■□□□□ 0.26
PTPN7-215ENST00000492451 TBC1D12O60347 775 aa16.67■□□□□ 0.26
PTPN7-215ENST00000492451 TBC1D8O95759 1140 aa16.67■□□□□ 0.26
PTPN7-215ENST00000492451 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
PTPN7-215ENST00000492451 VGLL4Q14135 290 aa16.67■□□□□ 0.26
PTPN7-215ENST00000492451 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
PTPN7-215ENST00000492451 DGKZQ13574 1117 aa16.66■□□□□ 0.26
PTPN7-215ENST00000492451 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
PTPN7-215ENST00000492451 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
PTPN7-215ENST00000492451 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
PTPN7-215ENST00000492451 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
PTPN7-215ENST00000492451 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
PTPN7-215ENST00000492451 INHBEP58166 350 aa16.65■□□□□ 0.26
PTPN7-215ENST00000492451 SREBF2Q12772 1141 aa16.65■□□□□ 0.26
PTPN7-215ENST00000492451 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
PTPN7-215ENST00000492451 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-215ENST00000492451 MYH1P12882 1939 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms