RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 HHIPL2Q6UWX4 724 aa26.82■■□□□ 1.88
USF3-203ENST00000491165 SDR42E1Q8WUS8 393 aa26.82■■□□□ 1.88
USF3-203ENST00000491165 TEKT1Q969V4 418 aa26.82■■□□□ 1.88
USF3-203ENST00000491165 TTC14Q96N46 770 aa26.82■■□□□ 1.88
USF3-203ENST00000491165 ECM29Q5VYK3 1845 aa26.81■■□□□ 1.88
USF3-203ENST00000491165 DDNO94850 711 aaPredicted RBP26.81■■□□□ 1.88
USF3-203ENST00000491165 EGFRP00533 1210 aa26.81■■□□□ 1.88
USF3-203ENST00000491165 SH3RF3Q8TEJ3 882 aaPredicted RBP26.81■■□□□ 1.88
USF3-203ENST00000491165 USP17L8P0C7I0 530 aa26.81■■□□□ 1.88
USF3-203ENST00000491165 RHBDL3P58872 404 aa26.81■■□□□ 1.88
USF3-203ENST00000491165 LDHCP07864 332 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 MAP4K1Q92918 833 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 EPB41L4AQ9HCS5 686 aaPredicted RBP26.8■■□□□ 1.88
USF3-203ENST00000491165 SERPINA10Q9UK55 444 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 NOL7Q9UMY1 257 aaKnown RBP26.8■■□□□ 1.88
USF3-203ENST00000491165 RPAP1Q9BWH6 1393 aaPredicted RBP26.8■■□□□ 1.88
USF3-203ENST00000491165 PPP4CP60510 307 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 TMED8Q6PL24 325 aaPredicted RBP26.8■■□□□ 1.88
USF3-203ENST00000491165 GPC2Q8N158 579 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 ZDHHC15Q96MV8 337 aa26.8■■□□□ 1.88
USF3-203ENST00000491165 FOCADQ5VW36 1801 aa26.79■■□□□ 1.88
USF3-203ENST00000491165 GSG1L2A8MUP6 293 aa26.79■■□□□ 1.88
USF3-203ENST00000491165 RBM5P52756 815 aaKnown RBP eCLIP26.79■■□□□ 1.88
USF3-203ENST00000491165 CFAP100Q494V2 611 aa26.79■■□□□ 1.88
USF3-203ENST00000491165 MRIQ9BWK5 157 aa26.79■■□□□ 1.88
USF3-203ENST00000491165 HDLBPQ00341 1268 aaKnown RBP26.78■■□□□ 1.88
USF3-203ENST00000491165 SLF2Q8IX21 1173 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 RASEFQ8IZ41 740 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 PRMT6Q96LA8 375 aaPredicted RBP26.78■■□□□ 1.88
USF3-203ENST00000491165 TSPY26PQ9H489 355 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 LIMCH1Q9UPQ0 1083 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 SLC4A4Q9Y6R1 1079 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 AK2P54819 239 aa26.78■■□□□ 1.88
USF3-203ENST00000491165 RPS12P25398 132 aaKnown RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 FOXD4L6Q3SYB3 417 aaPredicted RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 FOXD4L3Q6VB84 417 aaPredicted RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 USP48Q86UV5 1035 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 MICALL2Q8IY33 904 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 OGFOD1Q8N543 542 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 RBM8AQ9Y5S9 174 aaKnown RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 OFD1O75665 1012 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 DPF2Q92785 391 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 DSCC1Q9BVC3 393 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 CNOT7Q9UIV1 285 aaKnown RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.77■■□□□ 1.88
USF3-203ENST00000491165 TAF6LQ9Y6J9 622 aa26.77■■□□□ 1.88
USF3-203ENST00000491165 BAG3O95817 575 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 FGAP02671 866 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 TPM2P07951 284 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 CDC42EP5Q6NZY7 148 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 TMEM87AQ8NBN3 555 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 GDPD2Q9HCC8 539 aa26.76■■□□□ 1.87
USF3-203ENST00000491165 GADD45BO75293 160 aaPredicted RBP26.75■■□□□ 1.87
USF3-203ENST00000491165 RUFY3Q7L099 469 aa26.75■■□□□ 1.87
USF3-203ENST00000491165 SAMD7Q7Z3H4 446 aa26.75■■□□□ 1.87
USF3-203ENST00000491165 PATL2C9JE40 543 aaKnown RBP26.75■■□□□ 1.87
USF3-203ENST00000491165 CACNB3P54284 484 aa26.75■■□□□ 1.87
USF3-203ENST00000491165 ZNF280AP59817 542 aaPredicted RBP26.75■■□□□ 1.87
USF3-203ENST00000491165 NECTIN1Q15223 517 aa26.75■■□□□ 1.87
USF3-203ENST00000491165 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.75■■□□□ 1.87
USF3-203ENST00000491165 MYOZ2Q9NPC6 264 aa26.75■■□□□ 1.87
USF3-203ENST00000491165 SPDYE2BA6NHP3 402 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 SMIM22K7EJ46 135 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 APPP05067 770 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 SPDYE6P0CI01 402 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 EVX2Q03828 476 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 IFNL3Q8IZI9 196 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 RNF214Q8ND24 703 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 HDAC9Q9UKV0 1011 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 NAV1Q8NEY1 1877 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 ZSCAN22P10073 491 aaPredicted RBP26.74■■□□□ 1.87
USF3-203ENST00000491165 TGFBRAP1Q8WUH2 860 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 TDRD3Q9H7E2 651 aaKnown RBP26.74■■□□□ 1.87
USF3-203ENST00000491165 GPRC5DQ9NZD1 345 aa26.74■■□□□ 1.87
USF3-203ENST00000491165 MKRN1Q9UHC7 482 aaKnown RBP26.74■■□□□ 1.87
USF3-203ENST00000491165 DDX60LQ5H9U9 1706 aaKnown RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 ZNF500O60304 480 aaPredicted RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 WDHD1O75717 1129 aaPredicted RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 CASTP20810 708 aaKnown RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 EPS15P42566 896 aa26.73■■□□□ 1.87
USF3-203ENST00000491165 NBPF9Q3BBW0 867 aa26.73■■□□□ 1.87
USF3-203ENST00000491165 ZBED3Q96IU2 234 aaPredicted RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 NOL10Q9BSC4 688 aaKnown RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 DCP1AQ9NPI6 582 aaPredicted RBP26.73■■□□□ 1.87
USF3-203ENST00000491165 USP40Q9NVE5 1235 aa26.73■■□□□ 1.87
USF3-203ENST00000491165 TCHHQ07283 1943 aa26.73■■□□□ 1.87
USF3-203ENST00000491165 WNT10BO00744 389 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 NFIAQ12857 509 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 RBM26Q5T8P6 1007 aaKnown RBP26.72■■□□□ 1.87
USF3-203ENST00000491165 DDX4Q9NQI0 724 aaKnown RBP26.72■■□□□ 1.87
USF3-203ENST00000491165 CCDC39Q9UFE4 941 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 STX6O43752 255 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 GNAT2P19087 354 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 TEX11Q8IYF3 940 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 CRNKL1Q9BZJ0 848 aaKnown RBP26.72■■□□□ 1.87
USF3-203ENST00000491165 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.72■■□□□ 1.87
USF3-203ENST00000491165 SMC3Q9UQE7 1217 aa26.72■■□□□ 1.87
USF3-203ENST00000491165 PRKCSHP14314 528 aaPredicted RBP26.71■■□□□ 1.87
USF3-203ENST00000491165 MCM5P33992 734 aa26.71■■□□□ 1.87
USF3-203ENST00000491165 DLGAP5Q15398 846 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms