RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ZFPM1	Q8IX07	1006 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	WRNIP1	Q96S55	665 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	ZNF341	Q9BYN7	854 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	ELP3	Q9H9T3	547 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	NDUFB9	Q9Y6M9	179 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	MYH13	Q9UKX3	1938 aa		13.5	□□□□□ -0.25
GGA1-222	ENST00000489772	PLCG2	P16885	1265 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	TM4SF4	P48230	202 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	AAMP	Q13685	434 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	VGLL4	Q14135	290 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	WNK4	Q96J92	1243 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	RNF186	Q9NXI6	227 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	TSKS	Q9UJT2	592 aa		13.49	□□□□□ -0.25
GGA1-222	ENST00000489772	MANSC4	A6NHS7	340 aa	Predicted RBP	13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	SMARCA5	O60264	1052 aa	Predicted RBP	13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	TRPA1	O75762	1119 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	CYP7A1	P22680	504 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	INHBE	P58166	350 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	PPP4C	P60510	307 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	TEX11	Q8IYF3	940 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	MAGEB6	Q8N7X4	407 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	OPTN	Q96CV9	577 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	DNAJC2	Q99543	621 aa	Known RBP	13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	ANTXR1	Q9H6X2	564 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	DDX4	Q9NQI0	724 aa	Known RBP	13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	RFX7	Q2KHR2	1363 aa		13.48	□□□□□ -0.25
GGA1-222	ENST00000489772	GOLIM4	O00461	696 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	ATP5J	P18859	108 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	ADGRA1	Q86SQ6	560 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	CERS3	Q8IU89	383 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	GPATCH3	Q96I76	525 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	BOLA2	Q9H3K6	86 aa		13.47	□□□□□ -0.25
GGA1-222	ENST00000489772	SH3BP5L	Q7L8J4	393 aa		13.46	□□□□□ -0.25
GGA1-222	ENST00000489772	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA1-222	ENST00000489772	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA1-222	ENST00000489772	ECHDC1	Q9NTX5	307 aa		13.46	□□□□□ -0.25
GGA1-222	ENST00000489772	ZNF112	Q9UJU3	913 aa		13.46	□□□□□ -0.25
GGA1-222	ENST00000489772	DDTL	A6NHG4	134 aa	Predicted RBP	13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	SPDYE5	A6NIY4	337 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	ALDH1A1	P00352	501 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	GJA5	P36382	358 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	SLC9C2	Q5TAH2	1124 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	ERO1B	Q86YB8	467 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	TNS4	Q8IZW8	715 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	OTUD5	Q96G74	571 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	HAUS7	Q99871	368 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	PAG1	Q9NWQ8	432 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	SNCAIP	Q9Y6H5	919 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	ATRNL1	Q5VV63	1379 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	INPP5B	P32019	993 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	GTF2A2	P52657	109 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	HDAC1	Q13547	482 aa	Predicted RBP	13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	OTUD7B	Q6GQQ9	843 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	IFNL1	Q8IU54	200 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	MIGA1	Q8NAN2	632 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	TGFBRAP1	Q8WUH2	860 aa		13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	DHX36	Q9H2U1	1008 aa	Known RBP	13.45	□□□□□ -0.26
GGA1-222	ENST00000489772	FLT1	P17948	1338 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	TBC1D12	O60347	775 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	PDE6A	P16499	860 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	DYNLL1	P63167	89 aa	Known RBP	13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	MAP3K10	Q02779	954 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	PPAT	Q06203	517 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	NOL9	Q5SY16	702 aa	Known RBP	13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	MAPKAPK5	Q8IW41	473 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	GCC1	Q96CN9	775 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	9e-10	■□□□□ 10.8
GGA1-222	ENST00000489772	PICK1	Q9NRD5	415 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	PI4KB	Q9UBF8	816 aa		13.44	□□□□□ -0.26
GGA1-222	ENST00000489772	MYH2	Q9UKX2	1941 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	MAGEB6P1	A0A0J9YX57	407 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	TESPA1	A2RU30	521 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	PHF20L1	A8MW92	1017 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	TBC1D8	O95759	1140 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	USP5	P45974	858 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	PPIL2	Q13356	520 aa		13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	EDC3	Q96F86	508 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	RWDD1	Q9H446	243 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	COL2A1	P02458	1487 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-222	ENST00000489772	ZNF532	Q9HCE3	1301 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	AKAP11	Q9UKA4	1901 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	CCL15-CCL14	A0A0B4J2E2	113 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	IRF6	O14896	467 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	CTNND1	O60716	968 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	CETP	P11597	493 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	SNAPC2	Q13487	334 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	CCL15	Q16663	113 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	ANKRD45	Q5TZF3	282 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	SCYL3	Q8IZE3	742 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	MS4A4A	Q96JQ5	239 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	CFHR5	Q9BXR6	569 aa		13.42	□□□□□ -0.26
GGA1-222	ENST00000489772	TRIM34	Q9BYJ4	488 aa		13.42	□□□□□ -0.26

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