RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IL1RAPL2Q9NP60 686 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
VTI1A-206ENST00000489142 ATRNL1Q5VV63 1379 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 TESPA1A2RU30 521 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-206ENST00000489142 IRF6O14896 467 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 FKTNO75072 461 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 ENTPD3O75355 529 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 CYP2E1P05181 493 aaPredicted RBP17.19■□□□□ 0.34
VTI1A-206ENST00000489142 ZAP70P43403 619 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 GTF2A2P52657 109 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 GSTO1P78417 241 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 AACSQ86V21 672 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 PIH1D3Q9NQM4 214 aaKnown RBP17.19■□□□□ 0.34
VTI1A-206ENST00000489142 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
VTI1A-206ENST00000489142 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
VTI1A-206ENST00000489142 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
VTI1A-206ENST00000489142 FAM43AQ8N2R8 423 aa17.18■□□□□ 0.34
VTI1A-206ENST00000489142 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
VTI1A-206ENST00000489142 LDHCP07864 332 aa17.17■□□□□ 0.34
VTI1A-206ENST00000489142 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
VTI1A-206ENST00000489142 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
VTI1A-206ENST00000489142 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
VTI1A-206ENST00000489142 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
VTI1A-206ENST00000489142 AATFQ9NY61 560 aaKnown RBP eCLIP17.17■□□□□ 0.34
VTI1A-206ENST00000489142 ZNF112Q9UJU3 913 aa17.17■□□□□ 0.34
VTI1A-206ENST00000489142 ZSWIM8A7E2V4 1837 aa17.17■□□□□ 0.34
VTI1A-206ENST00000489142 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
VTI1A-206ENST00000489142 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
VTI1A-206ENST00000489142 PPIL2Q13356 520 aa17.16■□□□□ 0.34
VTI1A-206ENST00000489142 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
VTI1A-206ENST00000489142 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
VTI1A-206ENST00000489142 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
VTI1A-206ENST00000489142 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
VTI1A-206ENST00000489142 ATAD5Q96QE3 1844 aa17.16■□□□□ 0.34
VTI1A-206ENST00000489142 SIPA1L1O43166 1804 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 PHIPQ8WWQ0 1821 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 CAP1Q01518 475 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
VTI1A-206ENST00000489142 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
VTI1A-206ENST00000489142 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
VTI1A-206ENST00000489142 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
VTI1A-206ENST00000489142 BTBD19C9JJ37 291 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 HMMRO75330 724 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 CETPP11597 493 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 PPATQ06203 517 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 NOL9Q5SY16 702 aaKnown RBP17.14■□□□□ 0.33
VTI1A-206ENST00000489142 CD99L2Q8TCZ2 262 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
VTI1A-206ENST00000489142 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 HPS5Q9UPZ3 1129 aa17.14■□□□□ 0.33
VTI1A-206ENST00000489142 PTPRFP10586 1907 aa17.13■□□□□ 0.33
VTI1A-206ENST00000489142 IDH1O75874 414 aaKnown RBP17.13■□□□□ 0.33
VTI1A-206ENST00000489142 SOX10P56693 466 aa17.13■□□□□ 0.33
VTI1A-206ENST00000489142 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
VTI1A-206ENST00000489142 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
VTI1A-206ENST00000489142 CCDC84Q86UT8 332 aaPredicted RBP17.13■□□□□ 0.33
VTI1A-206ENST00000489142 YTHDC1Q96MU7 727 aaKnown RBP17.13■□□□□ 0.33
VTI1A-206ENST00000489142 OSBPL5Q9H0X9 879 aaPredicted RBP17.13■□□□□ 0.33
VTI1A-206ENST00000489142 TRIM17Q9Y577 477 aa17.13■□□□□ 0.33
VTI1A-206ENST00000489142 ECM2O94769 699 aaPredicted RBP17.12■□□□□ 0.33
VTI1A-206ENST00000489142 CYP7A1P22680 504 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 SLC4A8Q2Y0W8 1093 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 SCYL3Q8IZE3 742 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 ZFYVE28Q9HCC9 887 aa17.12■□□□□ 0.33
VTI1A-206ENST00000489142 SP3Q02447 781 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 OTOP1Q7RTM1 612 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 MAGEB6Q8N7X4 407 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 MIGA1Q8NAN2 632 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
VTI1A-206ENST00000489142 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 ZHX2Q9Y6X8 837 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 MYH1P12882 1939 aa17.11■□□□□ 0.33
VTI1A-206ENST00000489142 HTTP42858 3142 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 BAG3O95817 575 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 IFIT2P09913 472 aaKnown RBP17.1■□□□□ 0.33
VTI1A-206ENST00000489142 PTPRAP18433 802 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 MAP3K10Q02779 954 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
VTI1A-206ENST00000489142 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
VTI1A-206ENST00000489142 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
VTI1A-206ENST00000489142 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 SAP30BPQ9UHR5 308 aaKnown RBP17.1■□□□□ 0.33
VTI1A-206ENST00000489142 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 FLT1P17948 1338 aa17.1■□□□□ 0.33
VTI1A-206ENST00000489142 PDHXO00330 501 aa17.09■□□□□ 0.33
VTI1A-206ENST00000489142 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
VTI1A-206ENST00000489142 MOGSQ13724 837 aa17.09■□□□□ 0.33
VTI1A-206ENST00000489142 RRP1BQ14684 758 aaKnown RBP17.09■□□□□ 0.33
VTI1A-206ENST00000489142 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
VTI1A-206ENST00000489142 CHMP4BQ9H444 224 aaKnown RBP17.09■□□□□ 0.33
VTI1A-206ENST00000489142 COL2A1P02458 1487 aaPredicted RBP17.09■□□□□ 0.33
VTI1A-206ENST00000489142 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms