RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 NOLC1Q14978 699 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL16A1-215ENST00000488897 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
COL16A1-215ENST00000488897 SCAND2PQ9GZW5 306 aaPredicted RBP21.46■■□□□ 1.03
COL16A1-215ENST00000488897 GRIN3BO60391 1043 aa21.45■■□□□ 1.02
COL16A1-215ENST00000488897 DNTTIP2Q5QJE6 756 aaKnown RBP21.45■■□□□ 1.02
COL16A1-215ENST00000488897 PODNQ7Z5L7 613 aa21.45■■□□□ 1.02
COL16A1-215ENST00000488897 RBM10P98175 930 aaKnown RBP21.45■■□□□ 1.02
COL16A1-215ENST00000488897 TOB2Q14106 344 aaPredicted RBP21.45■■□□□ 1.02
COL16A1-215ENST00000488897 DTNBO60941 627 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 EGFRP00533 1210 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
COL16A1-215ENST00000488897 ZNF589Q86UQ0 364 aaPredicted RBP21.44■■□□□ 1.02
COL16A1-215ENST00000488897 ZNF830Q96NB3 372 aaPredicted RBP21.44■■□□□ 1.02
COL16A1-215ENST00000488897 SEC62Q99442 399 aaKnown RBP21.44■■□□□ 1.02
COL16A1-215ENST00000488897 LTBP3Q9NS15 1303 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 UQCRFS1P1P0C7P4 283 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 MAP3K11Q16584 847 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 DACT2Q5SW24 774 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 ADGRA1Q86SQ6 560 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 TTC12Q9H892 705 aaPredicted RBP21.44■■□□□ 1.02
COL16A1-215ENST00000488897 FAM13BQ9NYF5 915 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 RAI14Q9P0K7 980 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 LRP2BPQ9P2M1 347 aa21.44■■□□□ 1.02
COL16A1-215ENST00000488897 RFX7Q2KHR2 1363 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 RBM26Q5T8P6 1007 aaKnown RBP21.43■■□□□ 1.02
COL16A1-215ENST00000488897 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 NUP62CLQ9H1M0 184 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 DENND2AQ9ULE3 1009 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 PRIMPOLQ96LW4 560 aa21.43■■□□□ 1.02
COL16A1-215ENST00000488897 GOLGA6L4A6NEF3 574 aa21.42■■□□□ 1.02
COL16A1-215ENST00000488897 FZD9O00144 591 aa21.42■■□□□ 1.02
COL16A1-215ENST00000488897 PLCB2Q00722 1185 aa21.42■■□□□ 1.02
COL16A1-215ENST00000488897 TCEANC2Q96MN5 208 aa21.42■■□□□ 1.02
COL16A1-215ENST00000488897 GRIPAP1Q4V328 841 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 FAM200AQ8TCP9 573 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 GOLGA6L6A8MZA4 724 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
COL16A1-215ENST00000488897 COL9A3Q14050 684 aaPredicted RBP21.41■■□□□ 1.02
COL16A1-215ENST00000488897 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 SPTLC3Q9NUV7 552 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 U3KPZ7 1027 aaPredicted RBP21.41■■□□□ 1.02
COL16A1-215ENST00000488897 MYH13Q9UKX3 1938 aa21.41■■□□□ 1.02
COL16A1-215ENST00000488897 MIGA1Q8NAN2 632 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 SPATA32Q96LK8 384 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 NEK1Q96PY6 1258 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 TAF6LQ9Y6J9 622 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 MECOMQ03112 1051 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 MAGEB6Q8N7X4 407 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 MYRIPQ8NFW9 859 aa21.4■■□□□ 1.02
COL16A1-215ENST00000488897 DDX19AQ9NUU7 478 aaKnown RBP21.4■■□□□ 1.02
COL16A1-215ENST00000488897 TTF2Q9UNY4 1162 aaKnown RBP21.4■■□□□ 1.02
COL16A1-215ENST00000488897 LIG1P18858 919 aa21.39■■□□□ 1.02
COL16A1-215ENST00000488897 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.02
COL16A1-215ENST00000488897 PCNTO95613 3336 aa21.39■■□□□ 1.02
COL16A1-215ENST00000488897 GMPSP49915 693 aaPredicted RBP21.39■■□□□ 1.01
COL16A1-215ENST00000488897 EIF6P56537 245 aaKnown RBP21.39■■□□□ 1.01
COL16A1-215ENST00000488897 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
COL16A1-215ENST00000488897 FAM173BQ6P4H8 233 aa21.39■■□□□ 1.01
COL16A1-215ENST00000488897 CCDC129Q6ZRS4 1044 aa21.39■■□□□ 1.01
COL16A1-215ENST00000488897 ZNF512BQ96KM6 892 aaPredicted RBP21.39■■□□□ 1.01
COL16A1-215ENST00000488897 ADAMTSL1Q8N6G6 1762 aa21.39■■□□□ 1.01
COL16A1-215ENST00000488897 STK3Q13188 491 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 SAMD7Q7Z3H4 446 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 GTF3C6Q969F1 213 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 TNMDQ9H2S6 317 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 AP5Z1O43299 807 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 TYRO3Q06418 890 aa21.38■■□□□ 1.01
COL16A1-215ENST00000488897 LEO1Q8WVC0 666 aaPredicted RBP21.38■■□□□ 1.01
COL16A1-215ENST00000488897 LDHBP07195 334 aaKnown RBP21.37■■□□□ 1.01
COL16A1-215ENST00000488897 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
COL16A1-215ENST00000488897 EPS15P42566 896 aa21.37■■□□□ 1.01
COL16A1-215ENST00000488897 MCMDC2Q4G0Z9 681 aa21.37■■□□□ 1.01
COL16A1-215ENST00000488897 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
COL16A1-215ENST00000488897 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
COL16A1-215ENST00000488897 DACT1Q9NYF0 836 aa21.37■■□□□ 1.01
COL16A1-215ENST00000488897 MRVI1Q9Y6F6 885 aa21.37■■□□□ 1.01
COL16A1-215ENST00000488897 ASTN2O75129 1339 aaPredicted RBP21.37■■□□□ 1.01
COL16A1-215ENST00000488897 FAM205AQ6ZU69 1335 aa21.37■■□□□ 1.01
COL16A1-215ENST00000488897 DYNLL1P63167 89 aaKnown RBP21.36■■□□□ 1.01
COL16A1-215ENST00000488897 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 PUS7LQ9H0K6 701 aaKnown RBP21.36■■□□□ 1.01
COL16A1-215ENST00000488897 TFIP11Q9UBB9 837 aaKnown RBP21.36■■□□□ 1.01
COL16A1-215ENST00000488897 ZNF532Q9HCE3 1301 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 CACNB3P54284 484 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 CAMK4Q16566 473 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 RBM43Q6ZSC3 357 aaKnown RBP21.36■■□□□ 1.01
COL16A1-215ENST00000488897 WDR66Q8TBY9 1149 aa21.36■■□□□ 1.01
COL16A1-215ENST00000488897 NSUN4Q96CB9 384 aaKnown RBP21.36■■□□□ 1.01
COL16A1-215ENST00000488897 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
COL16A1-215ENST00000488897 TBC1D10BQ4KMP7 808 aaPredicted RBP21.35■■□□□ 1.01
COL16A1-215ENST00000488897 Q6ZUG5 572 aa21.35■■□□□ 1.01
COL16A1-215ENST00000488897 DZIP1Q86YF9 867 aaKnown RBP21.35■■□□□ 1.01
COL16A1-215ENST00000488897 ZSCAN16Q9H4T2 348 aaPredicted RBP21.35■■□□□ 1.01
COL16A1-215ENST00000488897 PDE6AP16499 860 aa21.35■■□□□ 1.01
COL16A1-215ENST00000488897 DLK2Q6UY11 383 aa21.35■■□□□ 1.01
COL16A1-215ENST00000488897 KIAA1524Q8TCG1 905 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms