RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SP3Q02447 781 aa23.79■■□□□ 1.4
CD55-209ENST00000488171 OS9Q13438 667 aaPredicted RBP23.79■■□□□ 1.4
CD55-209ENST00000488171 NOL9Q5SY16 702 aaKnown RBP23.79■■□□□ 1.4
CD55-209ENST00000488171 NSUN4Q96CB9 384 aaKnown RBP23.79■■□□□ 1.4
CD55-209ENST00000488171 BTBD19C9JJ37 291 aa23.78■■□□□ 1.4
CD55-209ENST00000488171 PANK1Q8TE04 598 aa23.78■■□□□ 1.4
CD55-209ENST00000488171 DBNDD2Q9BQY9 259 aa23.78■■□□□ 1.4
CD55-209ENST00000488171 ZFYVE28Q9HCC9 887 aa23.78■■□□□ 1.4
CD55-209ENST00000488171 DDTLA6NHG4 134 aaPredicted RBP23.78■■□□□ 1.4
CD55-209ENST00000488171 PHF20L1A8MW92 1017 aa23.78■■□□□ 1.4
CD55-209ENST00000488171 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.78■■□□□ 1.4
CD55-209ENST00000488171 ZCCHC17Q9NP64 241 aaKnown RBP23.78■■□□□ 1.4
CD55-209ENST00000488171 GSTO1P78417 241 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 MAP3K10Q02779 954 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 PICALMQ13492 652 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 CEP85Q6P2H3 762 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 RAI14Q9P0K7 980 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 KCNH4Q9UQ05 1017 aa23.77■■□□□ 1.4
CD55-209ENST00000488171 HTTP42858 3142 aa23.76■■□□□ 1.39
CD55-209ENST00000488171 SLURP2P0DP57 97 aa23.76■■□□□ 1.39
CD55-209ENST00000488171 TTC39AQ5SRH9 613 aa23.76■■□□□ 1.39
CD55-209ENST00000488171 ZSCAN29Q8IWY8 852 aaPredicted RBP23.76■■□□□ 1.39
CD55-209ENST00000488171 LDHCP07864 332 aa23.75■■□□□ 1.39
CD55-209ENST00000488171 CCDC158Q5M9N0 1113 aa23.75■■□□□ 1.39
CD55-209ENST00000488171 SNRKQ9NRH2 765 aa23.75■■□□□ 1.39
CD55-209ENST00000488171 MAST2Q6P0Q8 1798 aa23.74■■□□□ 1.39
CD55-209ENST00000488171 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
CD55-209ENST00000488171 EFCC1Q9HA90 598 aa23.74■■□□□ 1.39
CD55-209ENST00000488171 LRP2BPQ9P2M1 347 aa23.74■■□□□ 1.39
CD55-209ENST00000488171 PTPN22Q9Y2R2 807 aa23.74■■□□□ 1.39
CD55-209ENST00000488171 TNRC18O15417 2968 aaPredicted RBP23.73■■□□□ 1.39
CD55-209ENST00000488171 TLR2O60603 784 aa23.73■■□□□ 1.39
CD55-209ENST00000488171 MOGSQ13724 837 aa23.73■■□□□ 1.39
CD55-209ENST00000488171 SCYL3Q8IZE3 742 aa23.73■■□□□ 1.39
CD55-209ENST00000488171 ZNF512BQ96KM6 892 aaPredicted RBP23.73■■□□□ 1.39
CD55-209ENST00000488171 TLR7Q9NYK1 1049 aaKnown RBP23.73■■□□□ 1.39
CD55-209ENST00000488171 DBNLQ9UJU6 430 aaKnown RBP23.73■■□□□ 1.39
CD55-209ENST00000488171 MAP4K4O95819 1239 aaPredicted RBP23.72■■□□□ 1.39
CD55-209ENST00000488171 CYP2E1P05181 493 aaPredicted RBP23.72■■□□□ 1.39
CD55-209ENST00000488171 ANKRD23Q86SG2 305 aa23.72■■□□□ 1.39
CD55-209ENST00000488171 EAF2Q96CJ1 260 aaPredicted RBP23.72■■□□□ 1.39
CD55-209ENST00000488171 CCDC8Q9H0W5 538 aaPredicted RBP23.71■■□□□ 1.39
CD55-209ENST00000488171 DOCK1Q14185 1865 aa23.7■■□□□ 1.38
CD55-209ENST00000488171 MYO5AQ9Y4I1 1855 aaKnown RBP23.7■■□□□ 1.38
CD55-209ENST00000488171 COL2A1P02458 1487 aaPredicted RBP23.7■■□□□ 1.38
CD55-209ENST00000488171 PTPRAP18433 802 aa23.7■■□□□ 1.38
CD55-209ENST00000488171 ZSWIM8A7E2V4 1837 aa23.7■■□□□ 1.38
CD55-209ENST00000488171 PDHXO00330 501 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 CXCL11O14625 94 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 TBC1D12O60347 775 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 ZAP70P43403 619 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 NAA16Q6N069 864 aaPredicted RBP23.69■■□□□ 1.38
CD55-209ENST00000488171 OSBPL5Q9H0X9 879 aaPredicted RBP23.69■■□□□ 1.38
CD55-209ENST00000488171 PICK1Q9NRD5 415 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 EXOC6BQ9Y2D4 811 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 ZHX2Q9Y6X8 837 aa23.69■■□□□ 1.38
CD55-209ENST00000488171 PHIPQ8WWQ0 1821 aa23.68■■□□□ 1.38
CD55-209ENST00000488171 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
CD55-209ENST00000488171 MS4A1P11836 297 aa23.68■■□□□ 1.38
CD55-209ENST00000488171 ADGRA1Q86SQ6 560 aa23.68■■□□□ 1.38
CD55-209ENST00000488171 TEX11Q8IYF3 940 aa23.68■■□□□ 1.38
CD55-209ENST00000488171 SH3RF3Q8TEJ3 882 aaPredicted RBP23.68■■□□□ 1.38
CD55-209ENST00000488171 PIH1D3Q9NQM4 214 aaKnown RBP23.68■■□□□ 1.38
CD55-209ENST00000488171 ADGRA2Q96PE1 1338 aa23.68■■□□□ 1.38
CD55-209ENST00000488171 LACTBP83111 547 aaPredicted RBP23.67■■□□□ 1.38
CD55-209ENST00000488171 GPAT2Q6NUI2 795 aa23.67■■□□□ 1.38
CD55-209ENST00000488171 C17orf99Q6UX52 265 aa23.67■■□□□ 1.38
CD55-209ENST00000488171 ARHGAP39Q9C0H5 1083 aa23.67■■□□□ 1.38
CD55-209ENST00000488171 AATFQ9NY61 560 aaKnown RBP eCLIP23.67■■□□□ 1.38
CD55-209ENST00000488171 AFG3L2Q9Y4W6 797 aa23.67■■□□□ 1.38
CD55-209ENST00000488171 A0A0G2JLL6 359 aaPredicted RBP23.66■■□□□ 1.38
CD55-209ENST00000488171 FAM196BA6NMK8 535 aa23.66■■□□□ 1.38
CD55-209ENST00000488171 ARHGEF6Q15052 776 aa23.66■■□□□ 1.38
CD55-209ENST00000488171 PRRT2Q7Z6L0 340 aaPredicted RBP23.66■■□□□ 1.38
CD55-209ENST00000488171 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.66■■□□□ 1.38
CD55-209ENST00000488171 PPP4CP60510 307 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 ERC1Q8IUD2 1116 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 ARMC5Q96C12 935 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 NOL10Q9BSC4 688 aaKnown RBP23.65■■□□□ 1.38
CD55-209ENST00000488171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.65■■□□□ 1.38
CD55-209ENST00000488171 CPA4Q9UI42 421 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 COG6Q9Y2V7 657 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 CDK5RAP2Q96SN8 1893 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 PTPRFP10586 1907 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 SIPA1L1O43166 1804 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 IGSF3O75054 1194 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 BAG3O95817 575 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 ZBTB40Q9NUA8 1239 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 RCAN3Q9UKA8 241 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 PTCH2Q9Y6C5 1203 aa23.65■■□□□ 1.38
CD55-209ENST00000488171 CENPFP49454 3210 aa23.64■■□□□ 1.38
CD55-209ENST00000488171 FOCADQ5VW36 1801 aa23.64■■□□□ 1.37
CD55-209ENST00000488171 PLCG2P16885 1265 aa23.64■■□□□ 1.37
CD55-209ENST00000488171 CCDC84Q86UT8 332 aaPredicted RBP23.64■■□□□ 1.37
CD55-209ENST00000488171 AACSQ86V21 672 aa23.64■■□□□ 1.37
CD55-209ENST00000488171 DDX19BQ9UMR2 479 aa23.64■■□□□ 1.37
CD55-209ENST00000488171 CTGFP29279 349 aa23.63■■□□□ 1.37
CD55-209ENST00000488171 RRP1BQ14684 758 aaKnown RBP23.63■■□□□ 1.37
CD55-209ENST00000488171 KIF22Q14807 665 aa23.63■■□□□ 1.37
CD55-209ENST00000488171 FASTKD5Q7L8L6 764 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms