RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 WASHC4Q2M389 1173 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 EAPPQ56P03 285 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 HABP4Q5JVS0 413 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 DACT2Q5SW24 774 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MAP1SQ66K74 1059 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 CYP4F22Q6NT55 531 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 KRT26Q7Z3Y9 468 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 ANKK1Q8NFD2 765 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RUNDC1Q96C34 613 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 WNK4Q96J92 1243 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF333Q96JL9 665 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 ALG2Q9H553 416 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MYOZ2Q9NPC6 264 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 MAP10Q9P2G4 905 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RABGEF1Q9UJ41 708 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 A0A0G2JMZ2 1700 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 RFX7Q2KHR2 1363 aa3.5□□□□□ -1.85
DEPDC1-203ENST00000488146 PSMD14O00487 310 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 NPHP1O15259 732 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 FBLN1P23142 703 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 GTF2E1P29083 439 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 TNNI2P48788 182 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 PPIL2Q13356 520 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 HLFQ16534 295 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 BLOC1S3Q6QNY0 202 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 METTL22Q9BUU2 404 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 NRBP1Q9UHY1 535 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF112Q9UJU3 913 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 KCNH4Q9UQ05 1017 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 FOCADQ5VW36 1801 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 H7C1W4 665 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 ALDH1L1O75891 902 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 FBXO45P0C2W1 286 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF157P51786 506 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 AOC3Q16853 763 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 ANKRD13AQ8IZ07 590 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 TRPM4Q8TD43 1214 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 ZC3H12CQ9C0D7 883 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 MYH16Q9H6N6 1097 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 CWC25Q9NXE8 425 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 SLC27A5Q9Y2P5 690 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 MAFBQ9Y5Q3 323 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 COL4A6Q14031 1691 aa3.49□□□□□ -1.85
DEPDC1-203ENST00000488146 PRAMEF22A3QJZ6 481 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CXCL11O14625 94 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CT47B1P0C2W7 299 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CETPP11597 493 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CTSWP56202 376 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 GPSM2P81274 684 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 KCNH2Q12809 1159 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 UBE4AQ14139 1066 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CCDC30Q5VVM6 783 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 DCAF15Q66K64 600 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 ANKRD18AQ8IVF6 992 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 ZFYVE28Q9HCC9 887 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 PRM3Q9NNZ6 103 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 FRMPD3Q5JV73 1810 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 PHIPQ8WWQ0 1821 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 MYO1BO43795 1136 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 TMPOP42166 694 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 SEMA3FQ13275 785 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 KIF22Q14807 665 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 LRIT3Q3SXY7 679 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 ZNF804AQ7Z570 1209 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 USP48Q86UV5 1035 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 LAPTM4BQ86VI4 370 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 PHACTR3Q96KR7 559 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 GLIS2Q9BZE0 524 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 KCNH6Q9H252 994 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 TSPYL4Q9UJ04 414 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 COL11A1P12107 1806 aaPredicted RBP3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 SPEF2Q9C093 1822 aa3.48□□□□□ -1.85
DEPDC1-203ENST00000488146 CCDC85CA6NKD9 419 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 PPP1R12BO60237 982 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 HMOX1P09601 288 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 PPATQ06203 517 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 SCARF1Q14162 830 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TMEM164Q5U3C3 297 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 HHIPL2Q6UWX4 724 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 COPS6Q7L5N1 327 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 OTOP1Q7RTM1 612 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 OGFOD1Q8N543 542 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 FAM174AQ8TBP5 190 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 GGA3Q9NZ52 723 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TRMT112Q9UI30 125 aaKnown RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 ZMIZ1Q9ULJ6 1067 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 NR2E3Q9Y5X4 410 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 GJA3Q9Y6H8 435 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 MYH13Q9UKX3 1938 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 MROH5Q6ZUA9 1318 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 IRS4O14654 1257 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 AOC2O75106 756 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 U2AF1L5P0DN76 240 aaPredicted RBP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 BCAMP50895 628 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 CASP7P55210 303 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 U2AF1Q01081 240 aaKnown RBP eCLIP3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TUSC1Q2TAM9 212 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 TSGA10IPQ3SY00 556 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 C1orf53Q5VUE5 145 aa3.47□□□□□ -1.85
DEPDC1-203ENST00000488146 KSR2Q6VAB6 950 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms