RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SEC24BO95487 1268 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
HDLBP-242ENST00000488013 PTH1RQ03431 593 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-242ENST00000488013 FAM83AQ86UY5 434 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-242ENST00000488013 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
HDLBP-242ENST00000488013 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 KCNB2Q92953 911 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
HDLBP-242ENST00000488013 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-242ENST00000488013 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 TRDNQ13061 729 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
HDLBP-242ENST00000488013 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 HOOK2Q96ED9 719 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-242ENST00000488013 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
HDLBP-242ENST00000488013 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 FLT1P17948 1338 aa13.12□□□□□ -0.31
HDLBP-242ENST00000488013 SLC27A2O14975 620 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 PRKAB2O43741 272 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-242ENST00000488013 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 TM6SF1Q9BZW5 370 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 TDRD3Q9H7E2 651 aaKnown RBP13.11□□□□□ -0.31
HDLBP-242ENST00000488013 CNNM2Q9H8M5 875 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
HDLBP-242ENST00000488013 USP17L12C9JPN9 530 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 USP17L21D6R901 530 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 FOXP2O15409 715 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 EPHX2P34913 555 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 EPS15P42566 896 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 PDE4BQ07343 736 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 PPARAQ07869 468 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 FOXP4Q8IVH2 680 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 FAM151AQ8WW52 585 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 KRT23Q9C075 422 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 OSBPL5Q9H0X9 879 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-242ENST00000488013 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
HDLBP-242ENST00000488013 CYP21A2P08686 494 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 RABEP1Q15276 862 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 NBPF9Q3BBW0 867 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 MFSD6Q6ZSS7 791 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
HDLBP-242ENST00000488013 EHD4Q9H223 541 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 COL2A1P02458 1487 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-242ENST00000488013 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
HDLBP-242ENST00000488013 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
HDLBP-242ENST00000488013 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 PICALMQ13492 652 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-242ENST00000488013 NCOA7Q8NI08 942 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
HDLBP-242ENST00000488013 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 TAF1DQ9H5J8 278 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-242ENST00000488013 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
HDLBP-242ENST00000488013 SERPINB13Q9UIV8 391 aa13.08□□□□□ -0.32
HDLBP-242ENST00000488013 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 FGRP09769 529 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 NFIAQ12857 509 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 ESR2Q92731 530 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 NEK1Q96PY6 1258 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
HDLBP-242ENST00000488013 TCP10L2B9ZVM9 353 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 ORC4O43929 436 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 ST18O60284 1047 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 TBC1D12O60347 775 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 MCM2P49736 904 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 TCP10Q12799 353 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 RASA3Q14644 834 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
HDLBP-242ENST00000488013 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms