RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CYP2D6P10635 497 aa17.2■□□□□ 0.34
GCA-210ENST00000487445 GMPSP49915 693 aaPredicted RBP17.2■□□□□ 0.34
GCA-210ENST00000487445 CACNB3P54284 484 aa17.2■□□□□ 0.34
GCA-210ENST00000487445 TRDNQ13061 729 aa17.2■□□□□ 0.34
GCA-210ENST00000487445 RALYLQ86SE5 291 aaKnown RBP17.2■□□□□ 0.34
GCA-210ENST00000487445 AMOTL1Q8IY63 956 aa17.2■□□□□ 0.34
GCA-210ENST00000487445 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
GCA-210ENST00000487445 TDRD3Q9H7E2 651 aaKnown RBP17.2■□□□□ 0.34
GCA-210ENST00000487445 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
GCA-210ENST00000487445 FLT1P17948 1338 aa17.2■□□□□ 0.34
GCA-210ENST00000487445 SHTN1A0MZ66 631 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 EVX2Q03828 476 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 NCOA7Q8NI08 942 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 SNX21Q969T3 373 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 WDHD1O75717 1129 aaPredicted RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 MFSD6Q6ZSS7 791 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
GCA-210ENST00000487445 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
GCA-210ENST00000487445 NFIAQ12857 509 aa17.18■□□□□ 0.34
GCA-210ENST00000487445 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
GCA-210ENST00000487445 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 GRIN3BO60391 1043 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 AK2P54819 239 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 FGD1P98174 961 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 TCP10Q12799 353 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 SBK1Q52WX2 424 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
GCA-210ENST00000487445 MICALL2Q8IY33 904 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 CNOT7Q9UIV1 285 aaKnown RBP17.17■□□□□ 0.34
GCA-210ENST00000487445 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 NEDD4P46934 1319 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 B4E1Z4 1266 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 PRDM1O75626 825 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 PLCD1P51178 756 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 C12orf60Q5U649 245 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 STAG1Q8WVM7 1258 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 TTC14Q96N46 770 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
GCA-210ENST00000487445 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
GCA-210ENST00000487445 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
GCA-210ENST00000487445 SLC3A2P08195 630 aaKnown RBP17.16■□□□□ 0.34
GCA-210ENST00000487445 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
GCA-210ENST00000487445 DPF2Q92785 391 aa17.16■□□□□ 0.34
GCA-210ENST00000487445 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 GPC2Q8N158 579 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 KRT23Q9C075 422 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 CNNM2Q9H8M5 875 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 TMOD2Q9NZR1 351 aa17.15■□□□□ 0.34
GCA-210ENST00000487445 PRC1O43663 620 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 MYO1BO43795 1136 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 KDM4AO75164 1064 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.34
GCA-210ENST00000487445 MCM5P33992 734 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 MCM2P49736 904 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.34
GCA-210ENST00000487445 Q6ZUG5 572 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 ZSCAN29Q8IWY8 852 aaPredicted RBP17.14■□□□□ 0.34
GCA-210ENST00000487445 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.34
GCA-210ENST00000487445 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 OSBPL5Q9H0X9 879 aaPredicted RBP17.14■□□□□ 0.34
GCA-210ENST00000487445 VEZTQ9HBM0 779 aa17.14■□□□□ 0.34
GCA-210ENST00000487445 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 H7C1D1 291 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 WNT10BO00744 389 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 EGFRP00533 1210 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
GCA-210ENST00000487445 PDE4BQ07343 736 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 IDI2Q9BXS1 227 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 ZNF70Q9UC06 446 aaPredicted RBP17.14■□□□□ 0.33
GCA-210ENST00000487445 FAM198AQ9UFP1 575 aa17.14■□□□□ 0.33
GCA-210ENST00000487445 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 RANBP6O60518 1105 aaKnown RBP17.13■□□□□ 0.33
GCA-210ENST00000487445 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
GCA-210ENST00000487445 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
GCA-210ENST00000487445 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 TTC6Q86TZ1 520 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 MTMR14Q8NCE2 650 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 MKNK2Q9HBH9 465 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
GCA-210ENST00000487445 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms