RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 CXCL11O14625 94 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 RLBP1P12271 317 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 MCAMP43121 646 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 TNNI3KQ59H18 835 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 SH3BP5LQ7L8J4 393 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 NSUN4Q96CB9 384 aaKnown RBP15.29■□□□□ 0.04
SREBF1-215ENST00000487401 NOL10Q9BSC4 688 aaKnown RBP15.29■□□□□ 0.04
SREBF1-215ENST00000487401 DDX4Q9NQI0 724 aaKnown RBP15.29■□□□□ 0.04
SREBF1-215ENST00000487401 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 FPGT-TNNI3KV9GXZ4 949 aa15.29■□□□□ 0.04
SREBF1-215ENST00000487401 DDTLA6NHG4 134 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-215ENST00000487401 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 PDHXO00330 501 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 RHBDL3P58872 404 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
SREBF1-215ENST00000487401 ARAP2Q8WZ64 1704 aa15.27■□□□□ 0.04
SREBF1-215ENST00000487401 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
SREBF1-215ENST00000487401 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
SREBF1-215ENST00000487401 MS4A1P11836 297 aa15.27■□□□□ 0.04
SREBF1-215ENST00000487401 MAP3K10Q02779 954 aa15.27■□□□□ 0.04
SREBF1-215ENST00000487401 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
SREBF1-215ENST00000487401 ZNF384Q8TF68 577 aa15.27■□□□□ 0.04
SREBF1-215ENST00000487401 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
SREBF1-215ENST00000487401 BAG3O95817 575 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 PTPRAP18433 802 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 LACTBP83111 547 aaPredicted RBP15.26■□□□□ 0.03
SREBF1-215ENST00000487401 CAP1Q01518 475 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 NAA16Q6N069 864 aaPredicted RBP15.26■□□□□ 0.03
SREBF1-215ENST00000487401 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
SREBF1-215ENST00000487401 NBPF11Q86T75 865 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 PANK1Q8TE04 598 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 ARMC5Q96C12 935 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
SREBF1-215ENST00000487401 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
SREBF1-215ENST00000487401 ATRNL1Q5VV63 1379 aa15.25■□□□□ 0.03
SREBF1-215ENST00000487401 TBC1D12O60347 775 aa15.25■□□□□ 0.03
SREBF1-215ENST00000487401 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
SREBF1-215ENST00000487401 C17orf99Q6UX52 265 aa15.25■□□□□ 0.03
SREBF1-215ENST00000487401 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
SREBF1-215ENST00000487401 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
SREBF1-215ENST00000487401 PTCH2Q9Y6C5 1203 aa15.25■□□□□ 0.03
SREBF1-215ENST00000487401 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-215ENST00000487401 GNRH1P01148 92 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 SLURP2P0DP57 97 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 PLCG2P16885 1265 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 MOGSQ13724 837 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 CEP85Q6P2H3 762 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 GADL1Q6ZQY3 521 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-215ENST00000487401 TMEM106CQ9BVX2 250 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 ARHGAP39Q9C0H5 1083 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
SREBF1-215ENST00000487401 AFG3L2Q9Y4W6 797 aa15.24■□□□□ 0.03
SREBF1-215ENST00000487401 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 HOXD10P28358 340 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 ZAP70P43403 619 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 PSMC4P43686 418 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 PRMT2P55345 433 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 GPAT2Q6NUI2 795 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
SREBF1-215ENST00000487401 SH3RF3Q8TEJ3 882 aaPredicted RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
SREBF1-215ENST00000487401 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
SREBF1-215ENST00000487401 TRIM75PA6NK02 468 aa15.22■□□□□ 0.03
SREBF1-215ENST00000487401 IGSF3O75054 1194 aa15.22■□□□□ 0.03
SREBF1-215ENST00000487401 PPP4CP60510 307 aa15.22■□□□□ 0.03
SREBF1-215ENST00000487401 HSP90AB4PQ58FF6 505 aa15.22■□□□□ 0.03
SREBF1-215ENST00000487401 EAF2Q96CJ1 260 aaPredicted RBP15.22■□□□□ 0.03
SREBF1-215ENST00000487401 FAM196BA6NMK8 535 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 CYP2C8P10632 490 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 TGFBRAP1Q8WUH2 860 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 ZNF333Q96JL9 665 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 DHX36Q9H2U1 1008 aaKnown RBP15.21■□□□□ 0.03
SREBF1-215ENST00000487401 PIH1D3Q9NQM4 214 aaKnown RBP15.21■□□□□ 0.03
SREBF1-215ENST00000487401 TLR7Q9NYK1 1049 aaKnown RBP15.21■□□□□ 0.03
SREBF1-215ENST00000487401 PI4KBQ9UBF8 816 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 EXOC6BQ9Y2D4 811 aa15.21■□□□□ 0.03
SREBF1-215ENST00000487401 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
SREBF1-215ENST00000487401 CYP7A1P22680 504 aa15.2■□□□□ 0.02
SREBF1-215ENST00000487401 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
SREBF1-215ENST00000487401 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-215ENST00000487401 AACSQ86V21 672 aa15.2■□□□□ 0.02
SREBF1-215ENST00000487401 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
SREBF1-215ENST00000487401 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
SREBF1-215ENST00000487401 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
SREBF1-215ENST00000487401 HERC5Q9UII4 1024 aaKnown RBP15.2■□□□□ 0.02
SREBF1-215ENST00000487401 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms