RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SEZ6L2Q6UXD5 910 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 MPRIPQ6WCQ1 1025 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 SHISA5Q8N114 240 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 GATA6Q92908 595 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 OSBPL1AQ9BXW6 950 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 PCMTD2Q9NV79 361 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 PIM2Q9P1W9 311 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 CYP8B1Q9UNU6 501 aa8.27□□□□□ -1.09
SMARCC1-207ENST00000485833 ERVK-24P63145 666 aa8.26□□□□□ -1.09
SMARCC1-207ENST00000485833 XPCQ01831 940 aaPredicted RBP8.26□□□□□ -1.09
SMARCC1-207ENST00000485833 TTLL4Q14679 1199 aa8.26□□□□□ -1.09
SMARCC1-207ENST00000485833 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
SMARCC1-207ENST00000485833 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 MED26O95402 600 aa8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 NBPF11Q86T75 865 aa8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 SMYD4Q8IYR2 804 aaPredicted RBP8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 C1GALT1Q9NS00 363 aa8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
SMARCC1-207ENST00000485833 FAM170BA6NMN3 283 aa8.24□□□□□ -1.09
SMARCC1-207ENST00000485833 NEFMP07197 916 aa8.24□□□□□ -1.09
SMARCC1-207ENST00000485833 HCLS1P14317 486 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-207ENST00000485833 TTBK2Q6IQ55 1244 aa8.24□□□□□ -1.09
SMARCC1-207ENST00000485833 LGR6Q9HBX8 967 aa8.24□□□□□ -1.09
SMARCC1-207ENST00000485833 RNGTTO60942 597 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 SPINK2P20155 84 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 CYP27A1Q02318 531 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 MEI1Q5TIA1 1274 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 HOMEZQ8IX15 550 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 RNF214Q8ND24 703 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 PCDHA4Q9UN74 947 aa8.23□□□□□ -1.09
SMARCC1-207ENST00000485833 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 FOSL1P15407 271 aa8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 HOXA10P31260 410 aaPredicted RBP8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 GAL3ST3Q96A11 431 aa8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 ISL2Q96A47 359 aa8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 PCOLCE2Q9UKZ9 415 aa8.22□□□□□ -1.09
SMARCC1-207ENST00000485833 DCDC2CA8MYV0 355 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 CTSHP09668 335 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 ST13P50502 369 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 RPS26P62854 115 aaKnown RBP8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 CDK5R2Q13319 367 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 PPM1JQ5JR12 505 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 ZNF765Q7L2R6 523 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 DTX1Q86Y01 620 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 CSADQ9Y600 493 aa8.21□□□□□ -1.1
SMARCC1-207ENST00000485833 CYP26A1O43174 497 aa8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 SORBS3O60504 671 aa8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 RING1Q06587 406 aa8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 TAF1CQ15572 869 aaPredicted RBP8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 OGFOD3Q6PK18 319 aa8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 MRS2Q9HD23 443 aa8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
SMARCC1-207ENST00000485833 NTF4P34130 210 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 ITGAEP38570 1179 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 LIG3P49916 1009 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 PTPN11Q06124 597 aaPredicted RBP8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 MSMPQ1L6U9 139 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 ELMO3Q96BJ8 720 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 NOC4LQ9BVI4 516 aaKnown RBP8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 PICK1Q9NRD5 415 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 VTI1BQ9UEU0 232 aa8.19□□□□□ -1.1
SMARCC1-207ENST00000485833 FANCGO15287 622 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 FAM87AP0C7U9 286 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 LMNB1P20700 586 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 CYP27C1Q4G0S4 372 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 ZBTB37Q5TC79 503 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 LRFN4Q6PJG9 635 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 AGMOQ6ZNB7 445 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 BCL2L13Q9BXK5 485 aa8.18□□□□□ -1.1
SMARCC1-207ENST00000485833 RLBP1P12271 317 aa8.17□□□□□ -1.1
SMARCC1-207ENST00000485833 INPP5AQ14642 412 aa8.17□□□□□ -1.1
SMARCC1-207ENST00000485833 PLPPR2Q96GM1 343 aa8.17□□□□□ -1.1
SMARCC1-207ENST00000485833 LRRC4CQ9HCJ2 640 aa8.17□□□□□ -1.1
SMARCC1-207ENST00000485833 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
SMARCC1-207ENST00000485833 SEPT6Q14141 434 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 WIPI1Q5MNZ9 446 aaPredicted RBP8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 HDXQ7Z353 690 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 PCDHB5Q9Y5E4 795 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 SNCAIPQ9Y6H5 919 aa8.16□□□□□ -1.1
SMARCC1-207ENST00000485833 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 CYFIP1Q7L576 1253 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 UBE3DQ7Z6J8 389 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 KCT2Q8NC54 265 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 DUSP23Q9BVJ7 150 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 MIR1-1HGQ9H1L0 117 aa8.15□□□□□ -1.1
SMARCC1-207ENST00000485833 ADAMTS4O75173 837 aa8.14□□□□□ -1.11
SMARCC1-207ENST00000485833 PRNPP04156 253 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms