RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
TTC3-219ENST00000485402 RIC1Q4ADV7 1423 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
TTC3-219ENST00000485402 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
TTC3-219ENST00000485402 MRPS27Q92552 414 aaKnown RBP17.16■□□□□ 0.34
TTC3-219ENST00000485402 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 DHX32Q7L7V1 743 aaKnown RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 UBXN4Q92575 508 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 ZNF446Q9NWS9 450 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 WTIPA6NIX2 430 aaPredicted RBP17.15■□□□□ 0.34
TTC3-219ENST00000485402 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
TTC3-219ENST00000485402 SERPINB2P05120 415 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 ZAP70P43403 619 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 PHKA1P46020 1223 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 GSDMDP57764 484 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 LPIN2Q92539 896 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
TTC3-219ENST00000485402 ARMCX5Q6P1M9 558 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 SERPINC1P01008 464 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 SLC5A1P13866 664 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
TTC3-219ENST00000485402 NBPF11Q86T75 865 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
TTC3-219ENST00000485402 IQSEC3Q9UPP2 1182 aaPredicted RBP17.14■□□□□ 0.33
TTC3-219ENST00000485402 RGL2O15211 777 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 ATP1A3P13637 1013 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
TTC3-219ENST00000485402 CCDC102BQ68D86 513 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 CLCN6P51797 869 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 TPM4P67936 248 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
TTC3-219ENST00000485402 PFKFB2O60825 505 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 EZH2Q15910 746 aaKnown RBP17.13■□□□□ 0.33
TTC3-219ENST00000485402 CFAP100Q494V2 611 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 PDILTQ8N807 584 aa17.13■□□□□ 0.33
TTC3-219ENST00000485402 TAF1P21675 1872 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 SEC31AO94979 1220 aaKnown RBP17.12■□□□□ 0.33
TTC3-219ENST00000485402 TAF3Q5VWG9 929 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 CPLX1O14810 134 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 MCAMP43121 646 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 ENGASEQ8NFI3 743 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
TTC3-219ENST00000485402 BCAMP50895 628 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 TIGD1Q96MW7 591 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
TTC3-219ENST00000485402 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
TTC3-219ENST00000485402 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 TMCO3Q6UWJ1 677 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 CARD6Q9BX69 1037 aa17.11■□□□□ 0.33
TTC3-219ENST00000485402 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
TTC3-219ENST00000485402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.335e-7■■■□□ 16.6
TTC3-219ENST00000485402 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 ZSWIM4Q9H7M6 989 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 ZCCHC17Q9NP64 241 aaKnown RBP17.1■□□□□ 0.33
TTC3-219ENST00000485402 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
TTC3-219ENST00000485402 ST5P78524 1137 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
TTC3-219ENST00000485402 FGFR2P21802 821 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 DDR1Q08345 913 aa17.1■□□□□ 0.33
TTC3-219ENST00000485402 FMR1NBQ8N0W7 255 aaPredicted RBP17.1■□□□□ 0.33
TTC3-219ENST00000485402 E7EWF7 191 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 ZNF202O95125 648 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 CCDC34Q96HJ3 373 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 SPTLC2O15270 562 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 FANCCQ00597 558 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
TTC3-219ENST00000485402 ORC3Q9UBD5 711 aaPredicted RBP17.09■□□□□ 0.33
TTC3-219ENST00000485402 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms