RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 POLA2Q14181 598 aa14.15□□□□□ -0.14
SCFD1-206ENST00000484733 NEUROD6Q96NK8 337 aa14.15□□□□□ -0.14
SCFD1-206ENST00000484733 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 UQCRFS1P1P0C7P4 283 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 GSTO1P78417 241 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 MECOMQ03112 1051 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 SCYL3Q8IZE3 742 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 ZNF333Q96JL9 665 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 PDHXO00330 501 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 TBC1D12O60347 775 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 RHBDL3P58872 404 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 NBPF11Q86T75 865 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 TMEM57Q8N5G2 664 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 ZNF384Q8TF68 577 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
SCFD1-206ENST00000484733 COL2A1P02458 1487 aaPredicted RBP14.14□□□□□ -0.15
SCFD1-206ENST00000484733 IGSF3O75054 1194 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 ATP8B2P98198 1209 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 SSH3Q8TE77 659 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
SCFD1-206ENST00000484733 DDTLA6NHG4 134 aaPredicted RBP14.13□□□□□ -0.15
SCFD1-206ENST00000484733 CTNND1O60716 968 aaKnown RBP14.13□□□□□ -0.15
SCFD1-206ENST00000484733 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 GPAT2Q6NUI2 795 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
SCFD1-206ENST00000484733 NSUN4Q96CB9 384 aaKnown RBP14.13□□□□□ -0.15
SCFD1-206ENST00000484733 PTPRAP18433 802 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 FASTKD5Q7L8L6 764 aaKnown RBP14.12□□□□□ -0.15
SCFD1-206ENST00000484733 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 SLC45A1Q9Y2W3 748 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 AFG3L2Q9Y4W6 797 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 DOCK1Q14185 1865 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 A0A0G2JLL6 359 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-206ENST00000484733 SLC9C1Q4G0N8 1177 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 PRRT2Q7Z6L0 340 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-206ENST00000484733 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
SCFD1-206ENST00000484733 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 ARHGAP39Q9C0H5 1083 aa14.12□□□□□ -0.15
SCFD1-206ENST00000484733 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
SCFD1-206ENST00000484733 PHIPQ8WWQ0 1821 aa14.11□□□□□ -0.15
SCFD1-206ENST00000484733 PARK7Q99497 189 aaKnown RBP14.11□□□□□ -0.15
SCFD1-206ENST00000484733 HOXD10P28358 340 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 MCAMP43121 646 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 ZNF512BQ96KM6 892 aaPredicted RBP14.1□□□□□ -0.15
SCFD1-206ENST00000484733 CPA4Q9UI42 421 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 ZHX2Q9Y6X8 837 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 BCRP11274 1271 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 PICALMQ13492 652 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 PI16Q6UXB8 463 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 SRRDQ9UH36 339 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 NOP58Q9Y2X3 529 aaKnown RBP14.1□□□□□ -0.15
SCFD1-206ENST00000484733 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
SCFD1-206ENST00000484733 TNNI3KQ59H18 835 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 TBC1D9Q6ZT07 1266 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 OSBPL5Q9H0X9 879 aaPredicted RBP14.09□□□□□ -0.15
SCFD1-206ENST00000484733 FPGT-TNNI3KV9GXZ4 949 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 MAST2Q6P0Q8 1798 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 PTPRFP10586 1907 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 ZBTB7BO15156 539 aaPredicted RBP14.09□□□□□ -0.15
SCFD1-206ENST00000484733 EN2P19622 333 aaPredicted RBP14.09□□□□□ -0.15
SCFD1-206ENST00000484733 CTGFP29279 349 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 PSMC4P43686 418 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 HNRNPUQ00839 825 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCFD1-206ENST00000484733 TBC1D2Q9BYX2 928 aa14.09□□□□□ -0.15
SCFD1-206ENST00000484733 PPP4CP60510 307 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 CCDC158Q5M9N0 1113 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 OSBPP22059 807 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 TTC39AQ5SRH9 613 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 MIER1Q8N108 512 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.08□□□□□ -0.165e-6■■■□□ 17
SCFD1-206ENST00000484733 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
SCFD1-206ENST00000484733 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
SCFD1-206ENST00000484733 GCC1Q96CN9 775 aa14.07□□□□□ -0.16
SCFD1-206ENST00000484733 DBNDD2Q9BQY9 259 aa14.07□□□□□ -0.16
SCFD1-206ENST00000484733 MGAMO43451 1857 aa14.07□□□□□ -0.16
SCFD1-206ENST00000484733 SURF6O75683 361 aaKnown RBP14.07□□□□□ -0.16
SCFD1-206ENST00000484733 PLCG2P16885 1265 aa14.07□□□□□ -0.16
SCFD1-206ENST00000484733 TEX11Q8IYF3 940 aa14.07□□□□□ -0.16
SCFD1-206ENST00000484733 NOL10Q9BSC4 688 aaKnown RBP14.07□□□□□ -0.16
SCFD1-206ENST00000484733 FMNL1O95466 1100 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 BAG3O95817 575 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 FCGRTP55899 365 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 DHX36Q9H2U1 1008 aaKnown RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 HERC5Q9UII4 1024 aaKnown RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 CYP2C8P10632 490 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 RLBP1P12271 317 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 SH3RF3Q8TEJ3 882 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-206ENST00000484733 AGTPBP1Q9UPW5 1226 aa14.06□□□□□ -0.16
SCFD1-206ENST00000484733 MYPNQ86TC9 1320 aa14.05□□□□□ -0.16
SCFD1-206ENST00000484733 CYP2E1P05181 493 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms