RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 POU4F3Q15319 338 aa6.83□□□□□ -1.32
VPS13A-211ENST00000484581 CCNJLQ8IV13 435 aa6.83□□□□□ -1.32
VPS13A-211ENST00000484581 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
VPS13A-211ENST00000484581 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
VPS13A-211ENST00000484581 A0A1W2PP55 124 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ADH5P11766 374 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ADMP35318 185 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 JAG1P78504 1218 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ZNF423Q2M1K9 1284 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 SPRED3Q2MJR0 410 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 HS2ST1Q7LGA3 356 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 DYMQ7RTS9 669 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ZAR1Q86SH2 424 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 GALNT12Q8IXK2 581 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ZNF654Q8IZM8 581 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 ABI1Q8IZP0 508 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 SHISA5Q8N114 240 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 EZH1Q92800 747 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-211ENST00000484581 CORO1BQ9BR76 489 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 CCDC39Q9UFE4 941 aa6.82□□□□□ -1.32
VPS13A-211ENST00000484581 DDX41Q9UJV9 622 aaKnown RBP6.82□□□□□ -1.32
VPS13A-211ENST00000484581 NFICP08651 508 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 RAB6AP20340 208 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 TNNI2P48788 182 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 CYP27A1Q02318 531 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 MSMPQ1L6U9 139 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS13A-211ENST00000484581 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 DPH6Q7L8W6 267 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 USP48Q86UV5 1035 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
VPS13A-211ENST00000484581 BSDC1Q9NW68 430 aaPredicted RBP6.81□□□□□ -1.32
VPS13A-211ENST00000484581 FAM170BA6NMN3 283 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 PRNPP04156 253 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 GRIA4P48058 902 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 ST13P50502 369 aaKnown RBP6.8□□□□□ -1.32
VPS13A-211ENST00000484581 ZNF394Q53GI3 561 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 TCF12Q99081 682 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 SRCIN1Q9C0H9 1055 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 NRSN2Q9GZP1 204 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 FAM8A1Q9UBU6 413 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 INPP5FQ9Y2H2 1132 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 ACTL7BQ9Y614 415 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 USP31Q70CQ4 1352 aa6.8□□□□□ -1.32
VPS13A-211ENST00000484581 DNAJA1P31689 397 aaKnown RBP6.79□□□□□ -1.32
VPS13A-211ENST00000484581 ASPAP45381 313 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 RACK1P63244 317 aaKnown RBP6.79□□□□□ -1.32
VPS13A-211ENST00000484581 ARID5AQ03989 594 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 USPL1Q5W0Q7 1092 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 DNAJC2Q99543 621 aaKnown RBP6.79□□□□□ -1.32
VPS13A-211ENST00000484581 OSBPL7Q9BZF2 842 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 LNPKQ9C0E8 428 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 EHD4Q9H223 541 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 AP4E1Q9UPM8 1137 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 PCDHGB7Q9Y5F8 929 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 CADPSQ9ULU8 1353 aa6.79□□□□□ -1.32
VPS13A-211ENST00000484581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-211ENST00000484581 CDK11BP21127 795 aaKnown RBP6.78□□□□□ -1.32
VPS13A-211ENST00000484581 KIAA0319Q5VV43 1072 aa6.78□□□□□ -1.32
VPS13A-211ENST00000484581 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
VPS13A-211ENST00000484581 NOP9Q86U38 636 aaKnown RBP6.78□□□□□ -1.32
VPS13A-211ENST00000484581 DHX38Q92620 1227 aaKnown RBP6.78□□□□□ -1.32
VPS13A-211ENST00000484581 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-211ENST00000484581 B3GALT4O96024 378 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 USP17L7P0C7H9 530 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 GTF2F1P35269 517 aaKnown RBP eCLIP6.77□□□□□ -1.33
VPS13A-211ENST00000484581 PDE3AQ14432 1141 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 TAF1CQ15572 869 aaPredicted RBP6.77□□□□□ -1.33
VPS13A-211ENST00000484581 AGBL5Q8NDL9 886 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 EPS8L3Q8TE67 593 aaKnown RBP6.77□□□□□ -1.33
VPS13A-211ENST00000484581 SEMA6CQ9H3T2 930 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 FAM105AQ9NUU6 356 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 GGT7Q9UJ14 662 aa6.77□□□□□ -1.33
VPS13A-211ENST00000484581 CTSBP07858 339 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 GJA8P48165 433 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 MEI1Q5TIA1 1274 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 ERMP1Q7Z2K6 904 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 GATA6Q92908 595 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 ASIC4Q96FT7 647 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 NPHS2Q9NP85 383 aa6.76□□□□□ -1.33
VPS13A-211ENST00000484581 AOC2O75106 756 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 ECEL1O95672 775 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 RBL2Q08999 1139 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 VPS37DQ86XT2 251 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 ZNF576Q9H609 170 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 LGR6Q9HBX8 967 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 DAGLAQ9Y4D2 1042 aa6.75□□□□□ -1.33
VPS13A-211ENST00000484581 FGRP09769 529 aa6.74□□□□□ -1.33
VPS13A-211ENST00000484581 AP3B2Q13367 1082 aa6.74□□□□□ -1.33
VPS13A-211ENST00000484581 SOGA3Q5TF21 947 aa6.74□□□□□ -1.33
VPS13A-211ENST00000484581 OGFOD3Q6PK18 319 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms