RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 IFNL1Q8IU54 200 aa15.78■□□□□ 0.12
HDAC1-209ENST00000484305 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
HDAC1-209ENST00000484305 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
HDAC1-209ENST00000484305 DDTLA6NHG4 134 aaPredicted RBP15.77■□□□□ 0.12
HDAC1-209ENST00000484305 IGF2BP3O00425 579 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC1-209ENST00000484305 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 INPP5BP32019 993 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 NAA16Q6N069 864 aaPredicted RBP15.77■□□□□ 0.12
HDAC1-209ENST00000484305 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 ADGRA1Q86SQ6 560 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 CLASRPQ8N2M8 674 aaKnown RBP15.77■□□□□ 0.12
HDAC1-209ENST00000484305 OTUD5Q96G74 571 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 MS4A4AQ96JQ5 239 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 R3HDMLQ9H3Y0 253 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.12
HDAC1-209ENST00000484305 ATRNL1Q5VV63 1379 aa15.76■□□□□ 0.11
HDAC1-209ENST00000484305 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
HDAC1-209ENST00000484305 ZSCAN29Q8IWY8 852 aaPredicted RBP15.76■□□□□ 0.11
HDAC1-209ENST00000484305 PTPN18Q99952 460 aa15.76■□□□□ 0.11
HDAC1-209ENST00000484305 ANTXR1Q9H6X2 564 aa15.76■□□□□ 0.11
HDAC1-209ENST00000484305 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-209ENST00000484305 SPDYE5A6NIY4 337 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 MAP4K4O95819 1239 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-209ENST00000484305 ALDH1A1P00352 501 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 IFIT2P09913 472 aaKnown RBP15.75■□□□□ 0.11
HDAC1-209ENST00000484305 SLURP2P0DP57 97 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-209ENST00000484305 CFHR5Q9BXR6 569 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
HDAC1-209ENST00000484305 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
HDAC1-209ENST00000484305 GPR25O00155 361 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
HDAC1-209ENST00000484305 IDH1O75874 414 aaKnown RBP15.74■□□□□ 0.11
HDAC1-209ENST00000484305 GTF2A2P52657 109 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 MAP3K10Q02779 954 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 DGKZQ13574 1117 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 TEX11Q8IYF3 940 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 ZNF296Q8WUU4 475 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-209ENST00000484305 ABHD8Q96I13 439 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 NOL10Q9BSC4 688 aaKnown RBP15.74■□□□□ 0.11
HDAC1-209ENST00000484305 MCOLN1Q9GZU1 580 aa15.74■□□□□ 0.11
HDAC1-209ENST00000484305 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 IRF6O14896 467 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 IGSF3O75054 1194 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 BAG3O95817 575 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 CYP7A1P22680 504 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 PPP4CP60510 307 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 CCL15Q16663 113 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
HDAC1-209ENST00000484305 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-209ENST00000484305 PPATQ06203 517 aa15.72■□□□□ 0.11
HDAC1-209ENST00000484305 PPIL2Q13356 520 aa15.72■□□□□ 0.11
HDAC1-209ENST00000484305 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
HDAC1-209ENST00000484305 NOL9Q5SY16 702 aaKnown RBP15.72■□□□□ 0.11
HDAC1-209ENST00000484305 OTUD7BQ6GQQ9 843 aa15.72■□□□□ 0.11
HDAC1-209ENST00000484305 MAGEB6Q8N7X4 407 aa15.72■□□□□ 0.11
HDAC1-209ENST00000484305 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
HDAC1-209ENST00000484305 OSBPL5Q9H0X9 879 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-209ENST00000484305 SIPA1L1O43166 1804 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 PLCG2P16885 1265 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 DYNLL1P63167 89 aaKnown RBP15.71■□□□□ 0.11
HDAC1-209ENST00000484305 CRHR2Q13324 411 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
HDAC1-209ENST00000484305 TGFBRAP1Q8WUH2 860 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 DCTPP1Q9H773 170 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
HDAC1-209ENST00000484305 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.1
HDAC1-209ENST00000484305 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 TBC1D12O60347 775 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 FKTNO75072 461 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 CETPP11597 493 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 CTU1Q7Z7A3 348 aaKnown RBP15.7■□□□□ 0.1
HDAC1-209ENST00000484305 MAPKAPK5Q8IW41 473 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 MIGA1Q8NAN2 632 aa15.7■□□□□ 0.1
HDAC1-209ENST00000484305 EDC3Q96F86 508 aaKnown RBP15.7■□□□□ 0.1
HDAC1-209ENST00000484305 DNAJC2Q99543 621 aaKnown RBP15.7■□□□□ 0.1
HDAC1-209ENST00000484305 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
HDAC1-209ENST00000484305 PHIPQ8WWQ0 1821 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 MYH1P12882 1939 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 GOLIM4O00461 696 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
HDAC1-209ENST00000484305 TTF1Q15361 905 aaPredicted RBP15.69■□□□□ 0.1
HDAC1-209ENST00000484305 SCYL3Q8IZE3 742 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 KCNH4Q9UQ05 1017 aa15.69■□□□□ 0.1
HDAC1-209ENST00000484305 FLT1P17948 1338 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 ATAD5Q96QE3 1844 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 BTBD19C9JJ37 291 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 PTPRAP18433 802 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 ATP5JP18859 108 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 PICK1Q9NRD5 415 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.68■□□□□ 0.1
HDAC1-209ENST00000484305 PALD1Q9ULE6 856 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms