RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 FANCD2OSQ96PS1 177 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 SRCIN1Q9C0H9 1055 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 PCMTD2Q9NV79 361 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 FAM8A1Q9UBU6 413 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 ADGRE2Q9UHX3 823 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 SPG7Q9UQ90 795 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 COL17A1Q9UMD9 1497 aaPredicted RBP3.91□□□□□ -1.78
ITGB1-213ENST00000484088 CNTNAP4Q9C0A0 1308 aa3.91□□□□□ -1.78
ITGB1-213ENST00000484088 SART1O43290 800 aaKnown RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 GADD45BO75293 160 aaPredicted RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 FBXO24O75426 580 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 LEFTY1O75610 366 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 CYP11A1P05108 521 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 GSTP1P09211 210 aaKnown RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 FOSL1P15407 271 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 CDK8P49336 464 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 ST13P50502 369 aaKnown RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 XPCQ01831 940 aaPredicted RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 ZC3H12AQ5D1E8 599 aaKnown RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 MCTP1Q6DN14 999 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 ERMP1Q7Z2K6 904 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 LGR6Q9HBX8 967 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 NLRP2Q9NX02 1062 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 PIM2Q9P1W9 311 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 VTI1BQ9UEU0 232 aa3.9□□□□□ -1.79
ITGB1-213ENST00000484088 ZC3H7BQ9UGR2 993 aaKnown RBP3.9□□□□□ -1.79
ITGB1-213ENST00000484088 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-213ENST00000484088 SCAMP3O14828 347 aaKnown RBP3.89□□□□□ -1.79
ITGB1-213ENST00000484088 CELA3AP09093 270 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 RAB6AP20340 208 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 ASPAP45381 313 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 CDK5R2Q13319 367 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 NFKBIBQ15653 356 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 DYMQ7RTS9 669 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 SPRED2Q7Z698 418 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 ABI1Q8IZP0 508 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 GPBAR1Q8TDU6 330 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 CCDC39Q9UFE4 941 aa3.89□□□□□ -1.79
ITGB1-213ENST00000484088 GAS2O43903 313 aaKnown RBP3.88□□□□□ -1.79
ITGB1-213ENST00000484088 ARNTP27540 789 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 GSTT1P30711 240 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 RACK1P63244 317 aaKnown RBP3.88□□□□□ -1.79
ITGB1-213ENST00000484088 AP3B2Q13367 1082 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 TTLL4Q14679 1199 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 C9orf131Q5VYM1 1079 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 SULF2Q8IWU5 870 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 GAL3ST3Q96A11 431 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 ISL2Q96A47 359 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 HEXIM2Q96MH2 286 aaKnown RBP3.88□□□□□ -1.79
ITGB1-213ENST00000484088 TBC1D32Q96NH3 1257 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 COPRSQ9NQ92 184 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 METTL5Q9NRN9 209 aaKnown RBP3.88□□□□□ -1.79
ITGB1-213ENST00000484088 KRT82Q9NSB4 513 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 TMEM39AQ9NV64 488 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 PPM1HQ9ULR3 514 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 PLAGL2Q9UPG8 496 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 AP4E1Q9UPM8 1137 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 TRAK1Q9UPV9 953 aa3.88□□□□□ -1.79
ITGB1-213ENST00000484088 FAM177BA6PVY3 158 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 XRCC5P13010 732 aaKnown RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 RXRBP28702 533 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 INPP5AQ14642 412 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 TAF1CQ15572 869 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 INTS5Q6P9B9 1019 aaKnown RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 OGFOD3Q6PK18 319 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 DTHD1Q6ZMT9 781 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 ZNF574Q6ZN55 896 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 NBPF11Q86T75 865 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 TMEM87AQ8NBN3 555 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 FMNL2Q96PY5 1086 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 CORO1BQ9BR76 489 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 MRS2Q9HD23 443 aa3.87□□□□□ -1.79
ITGB1-213ENST00000484088 PAK6Q9NQU5 681 aaPredicted RBP3.87□□□□□ -1.79
ITGB1-213ENST00000484088 HCLS1P14317 486 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-213ENST00000484088 TAL1P17542 331 aaPredicted RBP3.86□□□□□ -1.79
ITGB1-213ENST00000484088 GARTP22102 1010 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 NME2P22392 152 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 CD96P40200 585 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 USP11P51784 963 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 ID3Q02535 119 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 PDE3AQ14432 1141 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 ZNF394Q53GI3 561 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 PAOXQ6QHF9 649 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 TPTE2Q6XPS3 522 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 NT5DC4Q86YG4 428 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 FAM181AQ8N9Y4 354 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 RHOVQ96L33 236 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 NOC4LQ9BVI4 516 aaKnown RBP3.86□□□□□ -1.79
ITGB1-213ENST00000484088 KCNQ5Q9NR82 932 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 DDX41Q9UJV9 622 aaKnown RBP3.86□□□□□ -1.79
ITGB1-213ENST00000484088 DAGLAQ9Y4D2 1042 aa3.86□□□□□ -1.79
ITGB1-213ENST00000484088 ZNF76P36508 570 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 OXCT1P55809 520 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 ERVK-24P63145 666 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 BNIP3Q12983 259 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 PPM1JQ5JR12 505 aa3.85□□□□□ -1.79
ITGB1-213ENST00000484088 MAP1SQ66K74 1059 aaPredicted RBP3.85□□□□□ -1.79
ITGB1-213ENST00000484088 PLD6Q8N2A8 252 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms