RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 HNRNPUQ00839 825 aaKnown RBP eCLIP24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 MECOMQ03112 1051 aa24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 SPATA5Q8NB90 893 aa24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 HMG20BQ9P0W2 317 aa24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 PTPRFP10586 1907 aa24.02■■□□□ 1.44
R3HDM1-215ENST00000483021 GPR75-ASB3A0A0A6YYF3 556 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 CXCL11O14625 94 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 MAP4K4O95819 1239 aaPredicted RBP24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 SLC9C1Q4G0N8 1177 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 NBPF11Q86T75 865 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 SCYL3Q8IZE3 742 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 PICK1Q9NRD5 415 aa24.01■■□□□ 1.43
R3HDM1-215ENST00000483021 PDHXO00330 501 aa24■■□□□ 1.43
R3HDM1-215ENST00000483021 LDHCP07864 332 aa24■■□□□ 1.43
R3HDM1-215ENST00000483021 UQCRFS1P1P0C7P4 283 aa24■■□□□ 1.43
R3HDM1-215ENST00000483021 PICALMQ13492 652 aa24■■□□□ 1.43
R3HDM1-215ENST00000483021 PTCH2Q9Y6C5 1203 aa24■■□□□ 1.43
R3HDM1-215ENST00000483021 PHIPQ8WWQ0 1821 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 POTEFA5A3E0 1075 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 PHF20L1A8MW92 1017 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 NPM3O75607 178 aaKnown RBP23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 PRMT2P55345 433 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 MAP3K10Q02779 954 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 C17orf99Q6UX52 265 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 SH3BP5LQ7L8J4 393 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 FTSJ3Q8IY81 847 aaKnown RBP23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 ZNF333Q96JL9 665 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 GPR108Q9NPR9 543 aa23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 DDX4Q9NQI0 724 aaKnown RBP23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 COL2A1P02458 1487 aaPredicted RBP23.99■■□□□ 1.43
R3HDM1-215ENST00000483021 POLA2Q14181 598 aa23.98■■□□□ 1.43
R3HDM1-215ENST00000483021 NSUN4Q96CB9 384 aaKnown RBP23.98■■□□□ 1.43
R3HDM1-215ENST00000483021 PARK7Q99497 189 aaKnown RBP23.98■■□□□ 1.43
R3HDM1-215ENST00000483021 TMEM106CQ9BVX2 250 aa23.98■■□□□ 1.43
R3HDM1-215ENST00000483021 DDTLA6NHG4 134 aaPredicted RBP23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 RHBDL3P58872 404 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 MOGSQ13724 837 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 PI16Q6UXB8 463 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 ZNF384Q8TF68 577 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 ADGRA2Q96PE1 1338 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 RAI14Q9P0K7 980 aa23.97■■□□□ 1.43
R3HDM1-215ENST00000483021 MGAMO43451 1857 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 ATAD5Q96QE3 1844 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 CTNND1O60716 968 aaKnown RBP23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 PTPRAP18433 802 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 MCAMP43121 646 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 OS9Q13438 667 aaPredicted RBP23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 FASTKD5Q7L8L6 764 aaKnown RBP23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 SSH3Q8TE77 659 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 ARHGAP39Q9C0H5 1083 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 CPA4Q9UI42 421 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 ZHX2Q9Y6X8 837 aa23.96■■□□□ 1.43
R3HDM1-215ENST00000483021 A0A0G2JLL6 359 aaPredicted RBP23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 ATP8B2P98198 1209 aa23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 TNNI3KQ59H18 835 aa23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 TBC1D9Q6ZT07 1266 aa23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 PRRT2Q7Z6L0 340 aaPredicted RBP23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 LRP2BPQ9P2M1 347 aa23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 FPGT-TNNI3KV9GXZ4 949 aa23.95■■□□□ 1.42
R3HDM1-215ENST00000483021 TBC1D12O60347 775 aa23.94■■□□□ 1.42
R3HDM1-215ENST00000483021 CCDC158Q5M9N0 1113 aa23.94■■□□□ 1.42
R3HDM1-215ENST00000483021 TTC39AQ5SRH9 613 aa23.94■■□□□ 1.42
R3HDM1-215ENST00000483021 NOL10Q9BSC4 688 aaKnown RBP23.94■■□□□ 1.42
R3HDM1-215ENST00000483021 AFG3L2Q9Y4W6 797 aa23.94■■□□□ 1.42
R3HDM1-215ENST00000483021 HOXD10P28358 340 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 GPAT2Q6NUI2 795 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 ITPRIPQ8IWB1 547 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 MIER1Q8N108 512 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 SLC45A1Q9Y2W3 748 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 CDK5RAP2Q96SN8 1893 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 FOCADQ5VW36 1801 aa23.93■■□□□ 1.42
R3HDM1-215ENST00000483021 IGSF3O75054 1194 aa23.92■■□□□ 1.42
R3HDM1-215ENST00000483021 SURF6O75683 361 aaKnown RBP23.92■■□□□ 1.42
R3HDM1-215ENST00000483021 PSMC4P43686 418 aa23.92■■□□□ 1.42
R3HDM1-215ENST00000483021 OSBPL5Q9H0X9 879 aaPredicted RBP23.92■■□□□ 1.42
R3HDM1-215ENST00000483021 MYO5AQ9Y4I1 1855 aaKnown RBP23.92■■□□□ 1.42
R3HDM1-215ENST00000483021 EN2P19622 333 aaPredicted RBP23.91■■□□□ 1.42
R3HDM1-215ENST00000483021 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
R3HDM1-215ENST00000483021 C1orf115Q9H7X2 142 aa23.91■■□□□ 1.42
R3HDM1-215ENST00000483021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.91■■□□□ 1.42
R3HDM1-215ENST00000483021 SRRDQ9UH36 339 aa23.91■■□□□ 1.42
R3HDM1-215ENST00000483021 ZBED9Q6R2W3 1325 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 FMNL1O95466 1100 aaPredicted RBP23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 BAG3O95817 575 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 BCRP11274 1271 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 PLCG2P16885 1265 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 SLC4A8Q2Y0W8 1093 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 NAA16Q6N069 864 aaPredicted RBP23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 GADL1Q6ZQY3 521 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 TEX11Q8IYF3 940 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 ZNF512BQ96KM6 892 aaPredicted RBP23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 TRIM47Q96LD4 638 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 DBNDD2Q9BQY9 259 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 NOP58Q9Y2X3 529 aaKnown RBP23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 LOC285556D6RIA3 1793 aa23.9■■□□□ 1.42
R3HDM1-215ENST00000483021 ZBTB7BO15156 539 aaPredicted RBP23.89■■□□□ 1.41
R3HDM1-215ENST00000483021 CYP2C8P10632 490 aa23.89■■□□□ 1.41
R3HDM1-215ENST00000483021 CTGFP29279 349 aa23.89■■□□□ 1.41
R3HDM1-215ENST00000483021 SH3TC2Q8TF17 1288 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms