RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 WNT8BQ93098 351 aa9.53□□□□□ -0.88
SEC22A-207ENST00000481965 WDR89Q96FK6 387 aaPredicted RBP9.53□□□□□ -0.88
SEC22A-207ENST00000481965 KRT82Q9NSB4 513 aa9.53□□□□□ -0.88
SEC22A-207ENST00000481965 B2RBV5 119 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 FSCN2O14926 492 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 PDPK1O15530 556 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 HTR3BO95264 441 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 GJB6O95452 261 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 EPXP11678 715 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 MAOBP27338 520 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 POU4F3Q15319 338 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 PLEKHG4Q58EX7 1191 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 ILDR2Q71H61 639 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 GOLGA6L1Q8N7Z2 621 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 C19orf47Q8N9M1 422 aaKnown RBP9.52□□□□□ -0.89
SEC22A-207ENST00000481965 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
SEC22A-207ENST00000481965 NXF1Q9UBU9 619 aaKnown RBP9.52□□□□□ -0.89
SEC22A-207ENST00000481965 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
SEC22A-207ENST00000481965 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 H3BM21 787 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 CYP11A1P05108 521 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 ALAS2P22557 587 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 FXNQ16595 210 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 OSGEPQ9NPF4 335 aa9.51□□□□□ -0.89
SEC22A-207ENST00000481965 VSIG8P0DPA2 414 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 PPP2R5EQ16537 467 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
SEC22A-207ENST00000481965 MRM1Q6IN84 353 aaKnown RBP9.5□□□□□ -0.89
SEC22A-207ENST00000481965 TMEM40Q8WWA1 233 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 ACDQ96AP0 544 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 ACSBG1Q96GR2 724 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 CORO1BQ9BR76 489 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 COL25A1Q9BXS0 654 aaPredicted RBP9.5□□□□□ -0.89
SEC22A-207ENST00000481965 GDF2Q9UK05 429 aaPredicted RBP9.5□□□□□ -0.89
SEC22A-207ENST00000481965 SNCAIPQ9Y6H5 919 aa9.5□□□□□ -0.89
SEC22A-207ENST00000481965 ESYT3A0FGR9 886 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 ACRP10323 421 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 LIG1P18858 919 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 KRT76Q01546 638 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 ZYXQ15942 572 aaKnown RBP9.49□□□□□ -0.89
SEC22A-207ENST00000481965 C6orf15Q6UXA7 325 aaPredicted RBP9.49□□□□□ -0.89
SEC22A-207ENST00000481965 CYFIP1Q7L576 1253 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 GALNT11Q8NCW6 608 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 TM9SF2Q99805 663 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 FANCLQ9NW38 375 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 REV1Q9UBZ9 1251 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 PCDHGC5Q9Y5F6 944 aa9.49□□□□□ -0.89
SEC22A-207ENST00000481965 M0R082 166 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 DLGAP3O95886 979 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 GUCY2CP25092 1073 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 ARL4DP49703 201 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 SQSTM1Q13501 440 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 OVOS1Q6IE37 1185 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 ZNF417Q8TAU3 575 aa9.48□□□□□ -0.89
SEC22A-207ENST00000481965 ZNF587Q96SQ5 575 aaPredicted RBP9.48□□□□□ -0.89
SEC22A-207ENST00000481965 SLC22A31A6NKX4 558 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 DCDC2CA8MYV0 355 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 LILRB5O75023 590 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 ADAM11O75078 769 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
SEC22A-207ENST00000481965 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
SEC22A-207ENST00000481965 KIF4BQ2VIQ3 1234 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 LRRFIP1Q32MZ4 808 aaKnown RBP9.47□□□□□ -0.89
SEC22A-207ENST00000481965 FAM117BQ6P1L5 589 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 SPATC1Q76KD6 591 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 TAB3Q8N5C8 712 aaPredicted RBP9.47□□□□□ -0.89
SEC22A-207ENST00000481965 JMYQ8N9B5 988 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 ZSCAN1Q8NBB4 408 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 ATG4CQ96DT6 458 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 TMEM260Q9NX78 707 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
SEC22A-207ENST00000481965 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 DDX3YO15523 660 aaKnown RBP9.46□□□□□ -0.9
SEC22A-207ENST00000481965 DIAPH1O60610 1272 aaKnown RBP9.46□□□□□ -0.9
SEC22A-207ENST00000481965 DDAH1O94760 285 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 CHMP4BP1P59074 171 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
SEC22A-207ENST00000481965 RING1Q06587 406 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 HDXQ7Z353 690 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 WFDC8Q8IUA0 241 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 NPAS3Q8IXF0 933 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 FAM178BQ8IXR5 827 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 GMIPQ9P107 970 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 LEMD3Q9Y2U8 911 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 ERBB4Q15303 1308 aa9.46□□□□□ -0.9
SEC22A-207ENST00000481965 CDC45O75419 566 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 NME1P15531 152 aaKnown RBP9.45□□□□□ -0.9
SEC22A-207ENST00000481965 PLCG1P19174 1290 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 NLRP12P59046 1061 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 PDE3AQ14432 1141 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 PTPROQ16827 1216 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 ZC3H12AQ5D1E8 599 aaKnown RBP9.45□□□□□ -0.9
SEC22A-207ENST00000481965 TMEM201Q5SNT2 666 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 Q6ZNB5 142 aa9.45□□□□□ -0.9
SEC22A-207ENST00000481965 CHSY3Q70JA7 882 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms