RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CRISPLD2Q9H0B8 497 aa16.77■□□□□ 0.28
NDC1-202ENST00000480952 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
NDC1-202ENST00000480952 SLC45A1Q9Y2W3 748 aa16.77■□□□□ 0.28
NDC1-202ENST00000480952 UTYO14607 1347 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 PHF20L1A8MW92 1017 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 SLC5A1P13866 664 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 FGFR2P21802 821 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 BMP8BP34820 402 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 GPR153Q6NV75 609 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 DEFB123Q8N688 67 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 AFG3L2Q9Y4W6 797 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
NDC1-202ENST00000480952 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
NDC1-202ENST00000480952 ANKRD13CQ8N6S4 541 aa16.75■□□□□ 0.27
NDC1-202ENST00000480952 DIS3LQ8TF46 1054 aaKnown RBP16.75■□□□□ 0.27
NDC1-202ENST00000480952 GDF15Q99988 308 aa16.75■□□□□ 0.27
NDC1-202ENST00000480952 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
NDC1-202ENST00000480952 PRDX5P30044 214 aa16.74■□□□□ 0.27
NDC1-202ENST00000480952 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
NDC1-202ENST00000480952 LPIN2Q92539 896 aa16.74■□□□□ 0.27
NDC1-202ENST00000480952 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.27
NDC1-202ENST00000480952 ZMYND8Q9ULU4 1186 aaPredicted RBP16.74■□□□□ 0.27
NDC1-202ENST00000480952 TRIM75PA6NK02 468 aa16.73■□□□□ 0.27
NDC1-202ENST00000480952 RGS3P49796 1198 aa16.73■□□□□ 0.27
NDC1-202ENST00000480952 Q7L0L9 218 aa16.73■□□□□ 0.27
NDC1-202ENST00000480952 ANKLE1Q8NAG6 615 aa16.73■□□□□ 0.27
NDC1-202ENST00000480952 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
NDC1-202ENST00000480952 ENTPD3O75355 529 aa16.72■□□□□ 0.27
NDC1-202ENST00000480952 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
NDC1-202ENST00000480952 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
NDC1-202ENST00000480952 STXBP5LQ9Y2K9 1186 aa16.72■□□□□ 0.27
NDC1-202ENST00000480952 EYA2O00167 538 aa16.71■□□□□ 0.27
NDC1-202ENST00000480952 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
NDC1-202ENST00000480952 SYN1P17600 705 aa16.71■□□□□ 0.27
NDC1-202ENST00000480952 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
NDC1-202ENST00000480952 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
NDC1-202ENST00000480952 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
NDC1-202ENST00000480952 HMGCRP04035 888 aa16.7■□□□□ 0.26
NDC1-202ENST00000480952 FAM110CQ1W6H9 321 aa16.7■□□□□ 0.26
NDC1-202ENST00000480952 LRIT3Q3SXY7 679 aa16.7■□□□□ 0.26
NDC1-202ENST00000480952 HMX1Q9NP08 348 aaPredicted RBP16.7■□□□□ 0.26
NDC1-202ENST00000480952 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
NDC1-202ENST00000480952 CUL9Q8IWT3 2517 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
NDC1-202ENST00000480952 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 TREML2Q5T2D2 321 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 DENND2AQ9ULE3 1009 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 RPTORQ8N122 1335 aa16.69■□□□□ 0.26
NDC1-202ENST00000480952 MGAMO43451 1857 aa16.68■□□□□ 0.26
NDC1-202ENST00000480952 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
NDC1-202ENST00000480952 SLURP2P0DP57 97 aa16.68■□□□□ 0.26
NDC1-202ENST00000480952 PICALMQ13492 652 aa16.68■□□□□ 0.26
NDC1-202ENST00000480952 CCDC84Q86UT8 332 aaPredicted RBP16.68■□□□□ 0.26
NDC1-202ENST00000480952 UBE2OQ9C0C9 1292 aaKnown RBP16.68■□□□□ 0.26
NDC1-202ENST00000480952 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
NDC1-202ENST00000480952 SALL1Q9NSC2 1324 aa16.68■□□□□ 0.26
NDC1-202ENST00000480952 SEMA3EO15041 775 aa16.67■□□□□ 0.26
NDC1-202ENST00000480952 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
NDC1-202ENST00000480952 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
NDC1-202ENST00000480952 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
NDC1-202ENST00000480952 DZIP1Q86YF9 867 aaKnown RBP16.67■□□□□ 0.26
NDC1-202ENST00000480952 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
NDC1-202ENST00000480952 USP44Q9H0E7 712 aa16.67■□□□□ 0.26
NDC1-202ENST00000480952 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
NDC1-202ENST00000480952 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
NDC1-202ENST00000480952 TRIM32Q13049 653 aa16.66■□□□□ 0.26
NDC1-202ENST00000480952 SPP2Q13103 211 aa16.66■□□□□ 0.26
NDC1-202ENST00000480952 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.26
NDC1-202ENST00000480952 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
NDC1-202ENST00000480952 SLF2Q8IX21 1173 aa16.66■□□□□ 0.26
NDC1-202ENST00000480952 PROCA1Q8NCQ7 364 aaPredicted RBP16.66■□□□□ 0.26
NDC1-202ENST00000480952 GJD2Q9UKL4 321 aa16.66■□□□□ 0.26
NDC1-202ENST00000480952 PHKA1P46020 1223 aa16.65■□□□□ 0.26
NDC1-202ENST00000480952 SIL1Q9H173 461 aa16.65■□□□□ 0.26
NDC1-202ENST00000480952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.65■□□□□ 0.26
NDC1-202ENST00000480952 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
NDC1-202ENST00000480952 ABCF2Q9UG63 623 aa16.65■□□□□ 0.26
NDC1-202ENST00000480952 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
NDC1-202ENST00000480952 GAKO14976 1311 aa16.65■□□□□ 0.26
NDC1-202ENST00000480952 BTDP43251 543 aa16.64■□□□□ 0.25
NDC1-202ENST00000480952 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
NDC1-202ENST00000480952 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
NDC1-202ENST00000480952 COL25A1Q9BXS0 654 aaPredicted RBP16.64■□□□□ 0.25
NDC1-202ENST00000480952 PTPRCP08575 1304 aa16.64■□□□□ 0.25
NDC1-202ENST00000480952 TBC1D12O60347 775 aa16.63■□□□□ 0.25
NDC1-202ENST00000480952 CYP2B6P20813 491 aa16.63■□□□□ 0.25
NDC1-202ENST00000480952 HMGCS2P54868 508 aa16.63■□□□□ 0.25
NDC1-202ENST00000480952 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
NDC1-202ENST00000480952 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
NDC1-202ENST00000480952 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
NDC1-202ENST00000480952 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
NDC1-202ENST00000480952 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
NDC1-202ENST00000480952 CIAO1O76071 339 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms