RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 FAM163AQ96GL9 167 aaPredicted RBP23.27■■□□□ 1.32
ABCF3-214ENST00000480562 DDX4Q9NQI0 724 aaKnown RBP23.27■■□□□ 1.32
ABCF3-214ENST00000480562 HMG20BQ9P0W2 317 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 CPA4Q9UI42 421 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 MROH7-TTC4A0A0A0MT08 1334 aa23.27■■□□□ 1.32
ABCF3-214ENST00000480562 DDTLA6NHG4 134 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-214ENST00000480562 PHF20L1A8MW92 1017 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 EN2P19622 333 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-214ENST00000480562 SLC9C1Q4G0N8 1177 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 C17orf99Q6UX52 265 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 TBC1D9Q6ZT07 1266 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 ZNF384Q8TF68 577 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 ZNF333Q96JL9 665 aa23.26■■□□□ 1.31
ABCF3-214ENST00000480562 DOCK2Q92608 1830 aa23.25■■□□□ 1.31
ABCF3-214ENST00000480562 SPATA5Q8NB90 893 aa23.25■■□□□ 1.31
ABCF3-214ENST00000480562 GPR75-ASB3A0A0A6YYF3 556 aa23.24■■□□□ 1.31
ABCF3-214ENST00000480562 MYCP01106 439 aaPredicted RBP23.24■■□□□ 1.31
ABCF3-214ENST00000480562 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
ABCF3-214ENST00000480562 SCYL3Q8IZE3 742 aa23.24■■□□□ 1.31
ABCF3-214ENST00000480562 ZHX2Q9Y6X8 837 aa23.24■■□□□ 1.31
ABCF3-214ENST00000480562 MKI67P46013 3256 aaKnown RBP23.23■■□□□ 1.31
ABCF3-214ENST00000480562 CTGFP29279 349 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 RHBDL3P58872 404 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 NBPF11Q86T75 865 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 TMEM106CQ9BVX2 250 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 PICK1Q9NRD5 415 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 ADGRA2Q96PE1 1338 aa23.23■■□□□ 1.31
ABCF3-214ENST00000480562 RBBP6Q7Z6E9 1792 aaKnown RBP23.22■■□□□ 1.31
ABCF3-214ENST00000480562 CXCL11O14625 94 aa23.22■■□□□ 1.31
ABCF3-214ENST00000480562 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-214ENST00000480562 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
ABCF3-214ENST00000480562 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
ABCF3-214ENST00000480562 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
ABCF3-214ENST00000480562 SH3TC2Q8TF17 1288 aa23.22■■□□□ 1.31
ABCF3-214ENST00000480562 NSUN4Q96CB9 384 aaKnown RBP23.22■■□□□ 1.31
ABCF3-214ENST00000480562 RAI14Q9P0K7 980 aa23.22■■□□□ 1.31
ABCF3-214ENST00000480562 BRCA2P51587 3418 aa23.21■■□□□ 1.31
ABCF3-214ENST00000480562 PTPRAP18433 802 aa23.21■■□□□ 1.31
ABCF3-214ENST00000480562 MCAMP43121 646 aa23.21■■□□□ 1.31
ABCF3-214ENST00000480562 CYP2C8P10632 490 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 PSMC4P43686 418 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 GSTO1P78417 241 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 POLA2Q14181 598 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 MIER1Q8N108 512 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 TRIM47Q96LD4 638 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 C1orf115Q9H7X2 142 aa23.2■■□□□ 1.3
ABCF3-214ENST00000480562 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.2■■□□□ 1.3
ABCF3-214ENST00000480562 A0A0G2JLL6 359 aaPredicted RBP23.19■■□□□ 1.3
ABCF3-214ENST00000480562 GNRH1P01148 92 aa23.19■■□□□ 1.3
ABCF3-214ENST00000480562 LDHCP07864 332 aa23.19■■□□□ 1.3
ABCF3-214ENST00000480562 SLC4A8Q2Y0W8 1093 aa23.19■■□□□ 1.3
ABCF3-214ENST00000480562 PRRT2Q7Z6L0 340 aaPredicted RBP23.19■■□□□ 1.3
ABCF3-214ENST00000480562 CCDC84Q86UT8 332 aaPredicted RBP23.19■■□□□ 1.3
ABCF3-214ENST00000480562 PARK7Q99497 189 aaKnown RBP23.19■■□□□ 1.3
ABCF3-214ENST00000480562 SNRKQ9NRH2 765 aa23.19■■□□□ 1.3
ABCF3-214ENST00000480562 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
ABCF3-214ENST00000480562 FAM196BA6NMK8 535 aa23.18■■□□□ 1.3
ABCF3-214ENST00000480562 CTNND1O60716 968 aaKnown RBP23.18■■□□□ 1.3
ABCF3-214ENST00000480562 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
ABCF3-214ENST00000480562 UQCRFS1P1P0C7P4 283 aa23.18■■□□□ 1.3
ABCF3-214ENST00000480562 OS9Q13438 667 aaPredicted RBP23.18■■□□□ 1.3
ABCF3-214ENST00000480562 GADL1Q6ZQY3 521 aa23.18■■□□□ 1.3
ABCF3-214ENST00000480562 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
ABCF3-214ENST00000480562 PRMT2P55345 433 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 ATP8B2P98198 1209 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 FASTKD5Q7L8L6 764 aaKnown RBP23.17■■□□□ 1.3
ABCF3-214ENST00000480562 SSH3Q8TE77 659 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 DBNDD2Q9BQY9 259 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 SRRDQ9UH36 339 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
ABCF3-214ENST00000480562 TRIM75PA6NK02 468 aa23.16■■□□□ 1.3
ABCF3-214ENST00000480562 NPM3O75607 178 aaKnown RBP23.16■■□□□ 1.3
ABCF3-214ENST00000480562 SURF6O75683 361 aaKnown RBP23.16■■□□□ 1.3
ABCF3-214ENST00000480562 BCRP11274 1271 aa23.16■■□□□ 1.3
ABCF3-214ENST00000480562 OSBPP22059 807 aa23.16■■□□□ 1.3
ABCF3-214ENST00000480562 TTC39AQ5SRH9 613 aa23.16■■□□□ 1.3
ABCF3-214ENST00000480562 FTSJ3Q8IY81 847 aaKnown RBP23.16■■□□□ 1.3
ABCF3-214ENST00000480562 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
ABCF3-214ENST00000480562 TBC1D12O60347 775 aa23.15■■□□□ 1.3
ABCF3-214ENST00000480562 RLBP1P12271 317 aa23.15■■□□□ 1.3
ABCF3-214ENST00000480562 ITPRIPQ8IWB1 547 aa23.15■■□□□ 1.3
ABCF3-214ENST00000480562 OSBPL5Q9H0X9 879 aaPredicted RBP23.15■■□□□ 1.3
ABCF3-214ENST00000480562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
ABCF3-214ENST00000480562 GPR108Q9NPR9 543 aa23.15■■□□□ 1.3
ABCF3-214ENST00000480562 MAP4K4O95819 1239 aaPredicted RBP23.14■■□□□ 1.29
ABCF3-214ENST00000480562 HOXD10P28358 340 aa23.14■■□□□ 1.29
ABCF3-214ENST00000480562 TEX11Q8IYF3 940 aa23.14■■□□□ 1.29
ABCF3-214ENST00000480562 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.29
ABCF3-214ENST00000480562 MYPNQ86TC9 1320 aa23.13■■□□□ 1.29
ABCF3-214ENST00000480562 PHIPQ8WWQ0 1821 aa23.13■■□□□ 1.29
ABCF3-214ENST00000480562 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
ABCF3-214ENST00000480562 NAA16Q6N069 864 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-214ENST00000480562 RAET1EQ8TD07 263 aa23.13■■□□□ 1.29
ABCF3-214ENST00000480562 ZBTB7BO15156 539 aaPredicted RBP23.12■■□□□ 1.29
ABCF3-214ENST00000480562 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
ABCF3-214ENST00000480562 MTFR1Q15390 333 aa23.12■■□□□ 1.29
ABCF3-214ENST00000480562 NOL10Q9BSC4 688 aaKnown RBP23.12■■□□□ 1.29
ABCF3-214ENST00000480562 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
ABCF3-214ENST00000480562 PTPRFP10586 1907 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms