RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-219ENST00000479941 PAPPA2Q9BXP8 1791 aa13.07□□□□□ -0.32
ATG4B-219ENST00000479941 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
ATG4B-219ENST00000479941 PRKG1Q13976 671 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
ATG4B-219ENST00000479941 ANGEL1Q9UNK9 670 aaKnown RBP13.06□□□□□ -0.32
ATG4B-219ENST00000479941 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
ATG4B-219ENST00000479941 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-219ENST00000479941 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 USP2O75604 605 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-219ENST00000479941 ECE1P42892 770 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 USP5P45974 858 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 RGMBQ6NW40 437 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-219ENST00000479941 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 APPBP2Q92624 585 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
ATG4B-219ENST00000479941 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
ATG4B-219ENST00000479941 FLT1P17948 1338 aa13.05□□□□□ -0.32
ATG4B-219ENST00000479941 MYH7P12883 1935 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-219ENST00000479941 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 MBD4O95243 580 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 CHGBP05060 677 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 LDLRAD1Q5T700 205 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
ATG4B-219ENST00000479941 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 MAPKAPK5Q8IW41 473 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 RILPL2Q969X0 211 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 ZNF341Q9BYN7 854 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
ATG4B-219ENST00000479941 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
ATG4B-219ENST00000479941 ZNF157P51786 506 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-219ENST00000479941 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 ANKRD13AQ8IZ07 590 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 OSBP2Q969R2 916 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
ATG4B-219ENST00000479941 AK9Q5TCS8 1911 aa13.02□□□□□ -0.32
ATG4B-219ENST00000479941 TBC1D12O60347 775 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 VEGFBP49765 207 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 ZMYM1Q5SVZ6 1142 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATG4B-219ENST00000479941 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.33
ATG4B-219ENST00000479941 ATP8A2Q9NTI2 1148 aa13.02□□□□□ -0.33
ATG4B-219ENST00000479941 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
ATG4B-219ENST00000479941 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
ATG4B-219ENST00000479941 GPAA1O43292 621 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 GNAT2P19087 354 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 FOXP4Q8IVH2 680 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-219ENST00000479941 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 WRNIP1Q96S55 665 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-219ENST00000479941 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 ZNF112Q9UJU3 913 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 PALD1Q9ULE6 856 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 CSADQ9Y600 493 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
ATG4B-219ENST00000479941 M0R2C6 588 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 HIP1O00291 1037 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 PRKAB2O43741 272 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 SLC10A3P09131 477 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 GSPT1P15170 499 aaKnown RBP13□□□□□ -0.33
ATG4B-219ENST00000479941 MAP2K2P36507 400 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 NOGQ13253 232 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 GRM1Q13255 1194 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 PPP1R3FQ6ZSY5 799 aaPredicted RBP13□□□□□ -0.33
ATG4B-219ENST00000479941 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
ATG4B-219ENST00000479941 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
ATG4B-219ENST00000479941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13□□□□□ -0.33
ATG4B-219ENST00000479941 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
ATG4B-219ENST00000479941 SAP30BPQ9UHR5 308 aaKnown RBP13□□□□□ -0.33
ATG4B-219ENST00000479941 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 FAM155AB1AL88 458 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-219ENST00000479941 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-219ENST00000479941 SDSP20132 328 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 VGLL4Q14135 290 aa12.99□□□□□ -0.33
ATG4B-219ENST00000479941 GIMAP6Q6P9H5 292 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms