RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 CRHR2Q13324 411 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
PRKN-207ENST00000479615 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 BRI3BPQ8WY22 251 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 R3HDMLQ9H3Y0 253 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 LAMB1P07942 1786 aa18.45■□□□□ 0.54
PRKN-207ENST00000479615 IRF6O14896 467 aa18.44■□□□□ 0.54
PRKN-207ENST00000479615 SP3Q02447 781 aa18.44■□□□□ 0.54
PRKN-207ENST00000479615 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
PRKN-207ENST00000479615 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
PRKN-207ENST00000479615 RFX7Q2KHR2 1363 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 CXCL11O14625 94 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 TBC1D12O60347 775 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 INPP5BP32019 993 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 RHBDL3P58872 404 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 MLLT1Q03111 559 aaPredicted RBP18.43■□□□□ 0.54
PRKN-207ENST00000479615 TAF1CQ15572 869 aaPredicted RBP18.43■□□□□ 0.54
PRKN-207ENST00000479615 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 CERS3Q8IU89 383 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 PICK1Q9NRD5 415 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 KCNH4Q9UQ05 1017 aa18.43■□□□□ 0.54
PRKN-207ENST00000479615 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
PRKN-207ENST00000479615 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
PRKN-207ENST00000479615 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
PRKN-207ENST00000479615 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
PRKN-207ENST00000479615 PHF20L1A8MW92 1017 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 PPP4CP60510 307 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 PICALMQ13492 652 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 SCYL3Q8IZE3 742 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 ZNF384Q8TF68 577 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
PRKN-207ENST00000479615 DHX36Q9H2U1 1008 aaKnown RBP18.41■□□□□ 0.54
PRKN-207ENST00000479615 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 DBNLQ9UJU6 430 aaKnown RBP18.41■□□□□ 0.54
PRKN-207ENST00000479615 TRIM17Q9Y577 477 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 OTOFQ9HC10 1997 aa18.41■□□□□ 0.54
PRKN-207ENST00000479615 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
PRKN-207ENST00000479615 TLR2O60603 784 aa18.4■□□□□ 0.54
PRKN-207ENST00000479615 CYP2E1P05181 493 aaPredicted RBP18.4■□□□□ 0.54
PRKN-207ENST00000479615 ANKRD23Q86SG2 305 aa18.4■□□□□ 0.54
PRKN-207ENST00000479615 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
PRKN-207ENST00000479615 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
PRKN-207ENST00000479615 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
PRKN-207ENST00000479615 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 DDTLA6NHG4 134 aaPredicted RBP18.39■□□□□ 0.53
PRKN-207ENST00000479615 BTBD19C9JJ37 291 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 RAB11FIP3O75154 756 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 GNRH1P01148 92 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 FASTKD5Q7L8L6 764 aaKnown RBP18.39■□□□□ 0.53
PRKN-207ENST00000479615 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 TEX11Q8IYF3 940 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
PRKN-207ENST00000479615 KIF1BPQ96EK5 621 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
PRKN-207ENST00000479615 OSBPL5Q9H0X9 879 aaPredicted RBP18.39■□□□□ 0.53
PRKN-207ENST00000479615 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
PRKN-207ENST00000479615 KIF22Q14807 665 aa18.38■□□□□ 0.53
PRKN-207ENST00000479615 AACSQ86V21 672 aa18.38■□□□□ 0.53
PRKN-207ENST00000479615 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
PRKN-207ENST00000479615 PI4KBQ9UBF8 816 aa18.38■□□□□ 0.53
PRKN-207ENST00000479615 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
PRKN-207ENST00000479615 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
PRKN-207ENST00000479615 PTPRAP18433 802 aa18.37■□□□□ 0.53
PRKN-207ENST00000479615 ZAP70P43403 619 aa18.37■□□□□ 0.53
PRKN-207ENST00000479615 MAP3K12Q12852 859 aa18.37■□□□□ 0.53
PRKN-207ENST00000479615 TTF1Q15361 905 aaPredicted RBP18.37■□□□□ 0.53
PRKN-207ENST00000479615 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
PRKN-207ENST00000479615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRKN-207ENST00000479615 ZHX2Q9Y6X8 837 aa18.37■□□□□ 0.53
PRKN-207ENST00000479615 AATFQ9NY61 560 aaKnown RBP eCLIP18.36■□□□□ 0.53
PRKN-207ENST00000479615 PTPN22Q9Y2R2 807 aa18.36■□□□□ 0.53
PRKN-207ENST00000479615 SLC45A1Q9Y2W3 748 aa18.36■□□□□ 0.53
PRKN-207ENST00000479615 PDHXO00330 501 aa18.35■□□□□ 0.53
PRKN-207ENST00000479615 PRMT2P55345 433 aa18.35■□□□□ 0.53
PRKN-207ENST00000479615 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
PRKN-207ENST00000479615 SH3RF3Q8TEJ3 882 aaPredicted RBP18.35■□□□□ 0.53
PRKN-207ENST00000479615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRKN-207ENST00000479615 PARK7Q99497 189 aaKnown RBP18.35■□□□□ 0.53
PRKN-207ENST00000479615 AFG3L2Q9Y4W6 797 aa18.35■□□□□ 0.53
PRKN-207ENST00000479615 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
PRKN-207ENST00000479615 A0A0G2JLL6 359 aaPredicted RBP18.34■□□□□ 0.53
PRKN-207ENST00000479615 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
PRKN-207ENST00000479615 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
PRKN-207ENST00000479615 PRRT2Q7Z6L0 340 aaPredicted RBP18.34■□□□□ 0.53
PRKN-207ENST00000479615 GINM1Q9NU53 330 aa18.34■□□□□ 0.53
PRKN-207ENST00000479615 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
PRKN-207ENST00000479615 CYP7A1P22680 504 aa18.33■□□□□ 0.52
PRKN-207ENST00000479615 LACTBP83111 547 aaPredicted RBP18.33■□□□□ 0.52
PRKN-207ENST00000479615 C17orf99Q6UX52 265 aa18.33■□□□□ 0.52
PRKN-207ENST00000479615 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
PRKN-207ENST00000479615 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
PRKN-207ENST00000479615 HOXD10P28358 340 aa18.32■□□□□ 0.52
PRKN-207ENST00000479615 MOGSQ13724 837 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms