RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 SPRYD7Q5W111 196 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 WNK4Q96J92 1243 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 WRNIP1Q96S55 665 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 CSRNP1Q96S65 589 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 HAUS7Q99871 368 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 ECHDC1Q9NTX5 307 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 PAG1Q9NWQ8 432 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 FOCADQ5VW36 1801 aa27.18■■□□□ 1.94
SF1-214ENST00000477596 TTF1Q15361 905 aaPredicted RBP27.18■■□□□ 1.94
SF1-214ENST00000477596 ZSCAN29Q8IWY8 852 aaPredicted RBP27.18■■□□□ 1.94
SF1-214ENST00000477596 CNKSR2Q8WXI2 1034 aa27.18■■□□□ 1.94
SF1-214ENST00000477596 HSPA8P11142 646 aaKnown RBP27.17■■□□□ 1.94
SF1-214ENST00000477596 PDE6AP16499 860 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 PPP4CP60510 307 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 MAP3K9P80192 1104 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 AAMPQ13685 434 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 DCAF15Q66K64 600 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 BEGAINQ9BUH8 593 aa27.17■■□□□ 1.94
SF1-214ENST00000477596 IGSF3O75054 1194 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 BAG3O95817 575 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 INPP5BP32019 993 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 SLFNL1Q499Z3 407 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 ZKSCAN4Q969J2 545 aaPredicted RBP27.16■■□□□ 1.94
SF1-214ENST00000477596 HOOK2Q96ED9 719 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 ZNF341Q9BYN7 854 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 OSBPL5Q9H0X9 879 aaPredicted RBP27.16■■□□□ 1.94
SF1-214ENST00000477596 SNCAIPQ9Y6H5 919 aa27.16■■□□□ 1.94
SF1-214ENST00000477596 UNCXA6NJT0 531 aa27.15■■□□□ 1.94
SF1-214ENST00000477596 MAP4K4O95819 1239 aaPredicted RBP27.15■■□□□ 1.94
SF1-214ENST00000477596 CHGBP05060 677 aa27.15■■□□□ 1.94
SF1-214ENST00000477596 CTCFP49711 727 aaPredicted RBP27.15■■□□□ 1.94
SF1-214ENST00000477596 SLC9C2Q5TAH2 1124 aa27.15■■□□□ 1.94
SF1-214ENST00000477596 LAMB1P07942 1786 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 SIPA1L1O43166 1804 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 IGHDP01880 384 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 LBX1P52954 281 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 ANKRD45Q5TZF3 282 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 MAPKAPK5Q8IW41 473 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 TGFBRAP1Q8WUH2 860 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 OPTNQ96CV9 577 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 CSADQ9Y600 493 aa27.14■■□□□ 1.94
SF1-214ENST00000477596 ZNF532Q9HCE3 1301 aa27.14■■□□□ 1.93
SF1-214ENST00000477596 COL2A1P02458 1487 aaPredicted RBP27.13■■□□□ 1.93
SF1-214ENST00000477596 TCRBV5S4A2TA0A5A2 114 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 FAM196BA6NMK8 535 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 NPM3O75607 178 aaKnown RBP27.13■■□□□ 1.93
SF1-214ENST00000477596 PLCG2P16885 1265 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 GCC1Q96CN9 775 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 GPATCH3Q96I76 525 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 MYH7P12883 1935 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 FLT1P17948 1338 aa27.13■■□□□ 1.93
SF1-214ENST00000477596 ZBTB48P10074 688 aaPredicted RBP27.11■■□□□ 1.93
SF1-214ENST00000477596 COL13A1Q5TAT6 717 aaPredicted RBP27.11■■□□□ 1.93
SF1-214ENST00000477596 OTUD5Q96G74 571 aa27.11■■□□□ 1.93
SF1-214ENST00000477596 RIOK1Q9BRS2 568 aaKnown RBP27.11■■□□□ 1.93
SF1-214ENST00000477596 RNF186Q9NXI6 227 aa27.11■■□□□ 1.93
SF1-214ENST00000477596 ZNF112Q9UJU3 913 aa27.11■■□□□ 1.93
SF1-214ENST00000477596 SALL3Q9BXA9 1300 aa27.11■■□□□ 1.93
SF1-214ENST00000477596 RWDD1Q9H446 243 aaPredicted RBP27.1■■□□□ 1.93
SF1-214ENST00000477596 PHF20L1A8MW92 1017 aa27.09■■□□□ 1.93
SF1-214ENST00000477596 TRPA1O75762 1119 aa27.09■■□□□ 1.93
SF1-214ENST00000477596 ADD2P35612 726 aa27.09■■□□□ 1.93
SF1-214ENST00000477596 PI4K2BQ8TCG2 481 aa27.09■■□□□ 1.93
SF1-214ENST00000477596 SAP30BPQ9UHR5 308 aaKnown RBP27.09■■□□□ 1.93
SF1-214ENST00000477596 DDX60LQ5H9U9 1706 aaKnown RBP27.08■■□□□ 1.93
SF1-214ENST00000477596 MAGEB6P1A0A0J9YX57 407 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 SPDYE5A6NIY4 337 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 CA12O43570 354 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 MX1P20591 662 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 SLC4A8Q2Y0W8 1093 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 SMC5Q8IY18 1101 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 TTC41PQ6P2S7 1318 aa27.08■■□□□ 1.93
SF1-214ENST00000477596 NAV1Q8NEY1 1877 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 TM4SF4P48230 202 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 MAP3K10Q02779 954 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 SREBF2Q12772 1141 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 B4GALNT3Q6L9W6 998 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 TMED8Q6PL24 325 aaPredicted RBP27.07■■□□□ 1.92
SF1-214ENST00000477596 REM2Q8IYK8 340 aaPredicted RBP27.07■■□□□ 1.92
SF1-214ENST00000477596 LCORLQ8N3X6 602 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 MYH1P12882 1939 aa27.07■■□□□ 1.92
SF1-214ENST00000477596 MANSC4A6NHS7 340 aaPredicted RBP27.06■■□□□ 1.92
SF1-214ENST00000477596 LNPKQ9C0E8 428 aa27.06■■□□□ 1.92
SF1-214ENST00000477596 SAGE1Q9NXZ1 904 aa27.06■■□□□ 1.92
SF1-214ENST00000477596 ZBTB47Q9UFB7 747 aaPredicted RBP27.06■■□□□ 1.92
SF1-214ENST00000477596 PALD1Q9ULE6 856 aa27.06■■□□□ 1.92
SF1-214ENST00000477596 DOCK1Q14185 1865 aa27.06■■□□□ 1.92
SF1-214ENST00000477596 IGF2BP3O00425 579 aaKnown RBP eCLIP27.05■■□□□ 1.92
SF1-214ENST00000477596 USP5P45974 858 aa27.05■■□□□ 1.92
SF1-214ENST00000477596 NOL9Q5SY16 702 aaKnown RBP27.05■■□□□ 1.92
SF1-214ENST00000477596 ERO1BQ86YB8 467 aa27.05■■□□□ 1.92
SF1-214ENST00000477596 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.05■■□□□ 1.92
SF1-214ENST00000477596 ARMT1Q9H993 441 aa27.05■■□□□ 1.92
SF1-214ENST00000477596 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.05■■□□□ 1.92
SF1-214ENST00000477596 MS4A4AQ96JQ5 239 aa27.04■■□□□ 1.92
SF1-214ENST00000477596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.04■■□□□ 1.92
SF1-214ENST00000477596 PRDM10Q9NQV6 1147 aa27.04■■□□□ 1.92
SF1-214ENST00000477596 MBD4O95243 580 aa27.03■■□□□ 1.92
SF1-214ENST00000477596 RRP1BQ14684 758 aaKnown RBP27.03■■□□□ 1.92
SF1-214ENST00000477596 CERS3Q8IU89 383 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms