RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 LRP2BPQ9P2M1 347 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 HMGN5P82970 282 aaKnown RBP7.62□□□□□ -1.19
PRKCI-202ENST00000476635 ATL3Q6DD88 541 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 CYB5R4Q7L1T6 521 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 NTRK3Q16288 839 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 SLC51AQ86UW1 340 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 TTLL6Q8N841 843 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 NSUN7Q8NE18 718 aaKnown RBP7.62□□□□□ -1.19
PRKCI-202ENST00000476635 TNPO1Q92973 898 aaKnown RBP7.62□□□□□ -1.19
PRKCI-202ENST00000476635 ANGEL1Q9UNK9 670 aaKnown RBP7.62□□□□□ -1.19
PRKCI-202ENST00000476635 SLC4A4Q9Y6R1 1079 aa7.62□□□□□ -1.19
PRKCI-202ENST00000476635 WDR33Q9C0J8 1336 aaKnown RBP7.62□□□□□ -1.19
PRKCI-202ENST00000476635 DDX11L8A8MPP1 907 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 DDAH1O94760 285 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 BAG3O95817 575 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 TTLL5Q6EMB2 1281 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 PGAP2Q9UHJ9 254 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 ELP1O95163 1332 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 SCN4AP35499 1836 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 SCRN1Q12765 414 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 NFKBIBQ15653 356 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 GRIK5Q16478 980 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 DEFB132Q7Z7B7 95 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 VPS37DQ86XT2 251 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 TEX2Q8IWB9 1127 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 UPF3BQ9BZI7 483 aaKnown RBP7.61□□□□□ -1.19
PRKCI-202ENST00000476635 NAPBQ9H115 298 aa7.61□□□□□ -1.19
PRKCI-202ENST00000476635 DAXXQ9UER7 740 aaPredicted RBP7.61□□□□□ -1.19
PRKCI-202ENST00000476635 AGBL3Q8NEM8 1001 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 FAM217BQ9NTX9 383 aaPredicted RBP7.6□□□□□ -1.19
PRKCI-202ENST00000476635 DAGLAQ9Y4D2 1042 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 FLT1P17948 1338 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 TCHHQ07283 1943 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 PRC1O43663 620 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 PDCP20941 246 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 MCM4P33991 863 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
PRKCI-202ENST00000476635 MTMR6Q9Y217 621 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 PRKAB2O43741 272 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 ZNF280AP59817 542 aaPredicted RBP7.6□□□□□ -1.19
PRKCI-202ENST00000476635 FUT2Q10981 343 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 APOBEC3HQ6NTF7 200 aaKnown RBP7.6□□□□□ -1.19
PRKCI-202ENST00000476635 NBPF11Q86T75 865 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 RAI14Q9P0K7 980 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 SWAP70Q9UH65 585 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 BRPF3Q9ULD4 1205 aa7.6□□□□□ -1.19
PRKCI-202ENST00000476635 ECE2O60344 883 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 ZSCAN22P10073 491 aaPredicted RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 DGKHQ86XP1 1220 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 USP17L3A6NCW0 530 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 USP17L4A6NCW7 530 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 YDJCA8MPS7 323 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 ENTPD3O75355 529 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 WDHD1O75717 1129 aaPredicted RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 CALM1P0DP23 149 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 CALM2P0DP24 149 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 CALM3P0DP25 149 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 DPEP1P16444 411 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 DYNLL1P63167 89 aaKnown RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 USP17L1Q7RTZ2 530 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 ILDR1Q86SU0 546 aaPredicted RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 ZSWIM5Q9P217 1185 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 BAG4O95429 457 aaKnown RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 RPS12P25398 132 aaKnown RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 APOA5Q6Q788 366 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 MFSD6Q6ZSS7 791 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 GBP4Q96PP9 640 aa7.59□□□□□ -1.19
PRKCI-202ENST00000476635 ZC3H12CQ9C0D7 883 aaKnown RBP7.59□□□□□ -1.19
PRKCI-202ENST00000476635 DHX16O60231 1041 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 TBC1D12O60347 775 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 FDPSP14324 419 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 IFNAR1P17181 557 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 BTDP43251 543 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 SKOR2Q2VWA4 1001 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 MFSD14BQ5SR56 506 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 DZIP1Q86YF9 867 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 SH3RF3Q8TEJ3 882 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 ESR2Q92731 530 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 PDGFDQ9GZP0 370 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 RBM28Q9NW13 759 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 OTOFQ9HC10 1997 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 STX6O43752 255 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 F13A1P00488 732 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 SNHG28P0DPA3 235 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 CPA1P15085 419 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 SYT1P21579 422 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 TATDN1Q6P1N9 297 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 ZSCAN16Q9H4T2 348 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 GINM1Q9NU53 330 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 ISY1Q9ULR0 285 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 FMNL1O95466 1100 aaPredicted RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 SLC3A2P08195 630 aaKnown RBP7.58□□□□□ -1.2
PRKCI-202ENST00000476635 GJB2P29033 226 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 CHRNA5P30532 468 aa7.58□□□□□ -1.2
PRKCI-202ENST00000476635 RESTQ13127 1097 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms