RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 GPBAR1Q8TDU6 330 aa8.44□□□□□ -1.06
PRKD3-208ENST00000475912 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
PRKD3-208ENST00000475912 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
PRKD3-208ENST00000475912 TTF2Q9UNY4 1162 aaKnown RBP8.44□□□□□ -1.06
PRKD3-208ENST00000475912 GRIK1P39086 918 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 RASIP1Q5U651 963 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 ZAR1Q86SH2 424 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 ANKRD24Q8TF21 1146 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 GATA6Q92908 595 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 ACSBG1Q96GR2 724 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 PIDD1Q9HB75 910 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 DISC1Q9NRI5 854 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 SAMM50Q9Y512 469 aa8.43□□□□□ -1.06
PRKD3-208ENST00000475912 FAM170BA6NMN3 283 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 FGD1P98174 961 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 KRTAP4-12Q9BQ66 201 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 AK5Q9Y6K8 562 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
PRKD3-208ENST00000475912 KIAA1324LA8MWY0 1029 aaPredicted RBP8.41□□□□□ -1.06
PRKD3-208ENST00000475912 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
PRKD3-208ENST00000475912 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
PRKD3-208ENST00000475912 TTLL4Q14679 1199 aa8.41□□□□□ -1.06
PRKD3-208ENST00000475912 PCNX4Q63HM2 1172 aa8.41□□□□□ -1.06
PRKD3-208ENST00000475912 INTS5Q6P9B9 1019 aaKnown RBP8.41□□□□□ -1.06
PRKD3-208ENST00000475912 SEZ6L2Q6UXD5 910 aa8.41□□□□□ -1.06
PRKD3-208ENST00000475912 C1GALT1Q9NS00 363 aa8.41□□□□□ -1.06
PRKD3-208ENST00000475912 LEMD3Q9Y2U8 911 aa8.41□□□□□ -1.06
PRKD3-208ENST00000475912 SMARCA2P51531 1590 aa8.4□□□□□ -1.06
PRKD3-208ENST00000475912 CCDC27Q2M243 656 aa8.4□□□□□ -1.06
PRKD3-208ENST00000475912 ZC3H12AQ5D1E8 599 aaKnown RBP8.4□□□□□ -1.06
PRKD3-208ENST00000475912 LLGL2Q6P1M3 1020 aa8.4□□□□□ -1.06
PRKD3-208ENST00000475912 CACNA2D2Q9NY47 1150 aa8.4□□□□□ -1.06
PRKD3-208ENST00000475912 PARP2Q9UGN5 583 aa8.4□□□□□ -1.06
PRKD3-208ENST00000475912 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
PRKD3-208ENST00000475912 TRIM37O94972 964 aa8.39□□□□□ -1.07
PRKD3-208ENST00000475912 NEFMP07197 916 aa8.39□□□□□ -1.07
PRKD3-208ENST00000475912 FBXO33Q7Z6M2 555 aa8.39□□□□□ -1.07
PRKD3-208ENST00000475912 SMYD4Q8IYR2 804 aaPredicted RBP8.39□□□□□ -1.07
PRKD3-208ENST00000475912 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
PRKD3-208ENST00000475912 CSADQ9Y600 493 aa8.39□□□□□ -1.07
PRKD3-208ENST00000475912 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
PRKD3-208ENST00000475912 SPINK2P20155 84 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 CDK5R2Q13319 367 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 LRRC14Q15048 493 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 SV2BQ7L1I2 683 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 ZNF765Q7L2R6 523 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
PRKD3-208ENST00000475912 DCDC2CA8MYV0 355 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 FOSL1P15407 271 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 ERVK-24P63145 666 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 DAB2P98082 770 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
PRKD3-208ENST00000475912 PSMD2Q13200 908 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
PRKD3-208ENST00000475912 CPSF6Q16630 551 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRKD3-208ENST00000475912 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 PCDHA4Q9UN74 947 aa8.37□□□□□ -1.07
PRKD3-208ENST00000475912 CYP26A1O43174 497 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 ADAMTS4O75173 837 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 PPM1JQ5JR12 505 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 DUSP27Q5VZP5 1158 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 RNF214Q8ND24 703 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 ISL2Q96A47 359 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 LRRC4CQ9HCJ2 640 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 CYP8B1Q9UNU6 501 aa8.36□□□□□ -1.07
PRKD3-208ENST00000475912 KIF21AQ7Z4S6 1674 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
PRKD3-208ENST00000475912 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
PRKD3-208ENST00000475912 TTBK2Q6IQ55 1244 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 OGFOD3Q6PK18 319 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 C12orf40Q86WS4 652 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
PRKD3-208ENST00000475912 PCOLCE2Q9UKZ9 415 aa8.35□□□□□ -1.07
PRKD3-208ENST00000475912 FAM87AP0C7U9 286 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 MSMPQ1L6U9 139 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 GAL3ST3Q96A11 431 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 LAMC3Q9Y6N6 1575 aa8.34□□□□□ -1.07
PRKD3-208ENST00000475912 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
PRKD3-208ENST00000475912 CTSHP09668 335 aa8.33□□□□□ -1.08
PRKD3-208ENST00000475912 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
PRKD3-208ENST00000475912 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRKD3-208ENST00000475912 ELMO3Q96BJ8 720 aa8.33□□□□□ -1.08
PRKD3-208ENST00000475912 BAZ1AQ9NRL2 1556 aaPredicted RBP8.32□□□□□ -1.08
PRKD3-208ENST00000475912 ERCC3P19447 782 aa8.32□□□□□ -1.08
PRKD3-208ENST00000475912 NTF4P34130 210 aa8.32□□□□□ -1.08
PRKD3-208ENST00000475912 INPP5AQ14642 412 aa8.32□□□□□ -1.08
PRKD3-208ENST00000475912 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
PRKD3-208ENST00000475912 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
PRKD3-208ENST00000475912 UBE3DQ7Z6J8 389 aa8.32□□□□□ -1.08
PRKD3-208ENST00000475912 LEFTY1O75610 366 aa8.31□□□□□ -1.08
PRKD3-208ENST00000475912 RING1Q06587 406 aa8.31□□□□□ -1.08
PRKD3-208ENST00000475912 SEPT6Q14141 434 aa8.31□□□□□ -1.08
PRKD3-208ENST00000475912 ZBTB37Q5TC79 503 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms