RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 OSBPL5Q9H0X9 879 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-224ENST00000475524 DHX36Q9H2U1 1008 aaKnown RBP18.11■□□□□ 0.49
MCF2L-224ENST00000475524 RRAGCQ9HB90 399 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-224ENST00000475524 FAM198AQ9UFP1 575 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-224ENST00000475524 LDHDQ86WU2 507 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 AMOTL1Q8IY63 956 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 SDR42E1Q8WUS8 393 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 NAPBQ9H115 298 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 GGA3Q9NZ52 723 aa18.1■□□□□ 0.49
MCF2L-224ENST00000475524 CNTNAP1P78357 1384 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 PRKAB2O43741 272 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 APPP05067 770 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 NFIAQ12857 509 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 VPS53Q5VIR6 699 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 ANGEL2Q5VTE6 544 aaKnown RBP18.09■□□□□ 0.49
MCF2L-224ENST00000475524 DCPSQ96C86 337 aaKnown RBP18.09■□□□□ 0.49
MCF2L-224ENST00000475524 BACH2Q9BYV9 841 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 VEZTQ9HBM0 779 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-224ENST00000475524 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
MCF2L-224ENST00000475524 DDX4Q9NQI0 724 aaKnown RBP18.09■□□□□ 0.49
MCF2L-224ENST00000475524 POLR2AP24928 1970 aaKnown RBP18.09■□□□□ 0.49
MCF2L-224ENST00000475524 ROBO3Q96MS0 1386 aa18.08■□□□□ 0.49
MCF2L-224ENST00000475524 UTRNP46939 3433 aa18.08■□□□□ 0.48
MCF2L-224ENST00000475524 TDO2P48775 406 aa18.08■□□□□ 0.48
MCF2L-224ENST00000475524 TTC6Q86TZ1 520 aa18.08■□□□□ 0.48
MCF2L-224ENST00000475524 GPBP1L1Q9HC44 474 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-224ENST00000475524 SIPA1L1O43166 1804 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 FGAP02671 866 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 NT5C2P49902 561 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 PTH1RQ03431 593 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 HOOK2Q96ED9 719 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 EHD4Q9H223 541 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 ANAPC4Q9UJX5 808 aa18.07■□□□□ 0.48
MCF2L-224ENST00000475524 TCP10L2B9ZVM9 353 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 HLA-DOAP06340 250 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
MCF2L-224ENST00000475524 CACNB3P54284 484 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 PICALMQ13492 652 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 RASA3Q14644 834 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 EAPPQ56P03 285 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-224ENST00000475524 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 USP26Q9BXU7 913 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 DEFB129Q9H1M3 183 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 MCM9Q9NXL9 1143 aa18.06■□□□□ 0.48
MCF2L-224ENST00000475524 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
MCF2L-224ENST00000475524 ASTN2O75129 1339 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-224ENST00000475524 USP17L12C9JPN9 530 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 USP17L21D6R901 530 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 YY1P25490 414 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 NECTIN1Q15223 517 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 IMMTQ16891 758 aaKnown RBP18.05■□□□□ 0.48
MCF2L-224ENST00000475524 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 CDC37L1Q7L3B6 337 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 METTL16Q86W50 562 aaKnown RBP18.05■□□□□ 0.48
MCF2L-224ENST00000475524 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
MCF2L-224ENST00000475524 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
MCF2L-224ENST00000475524 MYH8P13535 1937 aa18.04■□□□□ 0.48
MCF2L-224ENST00000475524 POLR3DP05423 398 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-224ENST00000475524 MCCP23508 829 aa18.04■□□□□ 0.48
MCF2L-224ENST00000475524 TCP10Q12799 353 aa18.04■□□□□ 0.48
MCF2L-224ENST00000475524 ZNF526Q8TF50 670 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-224ENST00000475524 KCNB2Q92953 911 aa18.04■□□□□ 0.48
MCF2L-224ENST00000475524 TEPSINQ96N21 525 aa18.04■□□□□ 0.48
MCF2L-224ENST00000475524 HERC5Q9UII4 1024 aaKnown RBP18.04■□□□□ 0.48
MCF2L-224ENST00000475524 TBC1D12O60347 775 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
MCF2L-224ENST00000475524 HSPA4P34932 840 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 MAP3K10Q02779 954 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 PPARAQ07869 468 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 TSGA10IPQ3SY00 556 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 KRT26Q7Z3Y9 468 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 FOXP4Q8IVH2 680 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-224ENST00000475524 ZNF287Q9HBT7 754 aa18.03■□□□□ 0.48
MCF2L-224ENST00000475524 ZNF213O14771 459 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 KIF3CO14782 793 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 ANAPC15P60006 121 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 GABPAQ06546 454 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 SUPT20HL1Q3ZLR7 823 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 SH3BP5LQ7L8J4 393 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 ZSCAN29Q8IWY8 852 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-224ENST00000475524 ZFPM1Q8IX07 1006 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 IL17RAQ96F46 866 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 TMEM39BQ9GZU3 492 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-224ENST00000475524 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 SERPINB13Q9UIV8 391 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 PALD1Q9ULE6 856 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 CLEC11AQ9Y240 323 aa18.02■□□□□ 0.48
MCF2L-224ENST00000475524 DDTLA6NHG4 134 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms