RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 PROCP04070 461 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 TCF3P15923 654 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 EIF4A3P38919 411 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 ERVK-24P63145 666 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 ZC3H12AQ5D1E8 599 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 GAL3ST3Q96A11 431 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 PPP1R9AQ9ULJ8 1098 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 SUPT16HQ9Y5B9 1047 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 ACTL7BQ9Y614 415 aa9.22□□□□□ -0.93
TM9SF3-204ENST00000475401 RAB6AP20340 208 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM160A1Q05DH4 1040 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 RHOVQ96L33 236 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 SSU72Q9NP77 194 aaKnown RBP9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 SNCAIPQ9Y6H5 919 aa9.21□□□□□ -0.94
TM9SF3-204ENST00000475401 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 RNGTTO60942 597 aaKnown RBP9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 HDLBPQ00341 1268 aaKnown RBP9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 WIPI1Q5MNZ9 446 aaPredicted RBP9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 ZNF654Q8IZM8 581 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 ARMC10Q8N2F6 343 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 FANCD2OSQ96PS1 177 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 STOML1Q9UBI4 398 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 PCDHGC5Q9Y5F6 944 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 CSADQ9Y600 493 aa9.2□□□□□ -0.94
TM9SF3-204ENST00000475401 MAP4P27816 1152 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 RPL6Q02878 288 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 PTPN11Q06124 597 aaPredicted RBP9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 MAP7Q14244 749 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 C9orf131Q5VYM1 1079 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 PAOXQ6QHF9 649 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 BEND4Q6ZU67 534 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 FBLIM1Q8WUP2 373 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 GATAD2BQ8WXI9 593 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 PLPPR2Q96GM1 343 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 DISC1Q9NRI5 854 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM95CA0A1B0GW59 222 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 PRAMEF27A3QJZ7 478 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 H2AFB1P0C5Y9 115 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 H2AFB2P0C5Z0 115 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 PRR23CQ6ZRP0 262 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 CDC37L1Q7L3B6 337 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 C12orf40Q86WS4 652 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 RNF214Q8ND24 703 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 ZNF296Q8WUU4 475 aaPredicted RBP9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 SPON2Q9BUD6 331 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 GSX1Q9H4S2 264 aaPredicted RBP9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 ROBO2Q9HCK4 1378 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
TM9SF3-204ENST00000475401 FANCGO15287 622 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 F13A1P00488 732 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 HCLS1P14317 486 aaPredicted RBP9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 INPP5AQ14642 412 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 TTLL4Q14679 1199 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 PPM1JQ5JR12 505 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 LRFN4Q6PJG9 635 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 NPM2Q86SE8 214 aaKnown RBP9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 SMYD4Q8IYR2 804 aaPredicted RBP9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 DDX41Q9UJV9 622 aaKnown RBP9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
TM9SF3-204ENST00000475401 ERCC5P28715 1186 aaPredicted RBP9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 ETF1P62495 437 aaKnown RBP9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 PDE4BQ07343 736 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 MPP2Q14168 576 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 CWF19L2Q2TBE0 894 aaKnown RBP9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 METTL16Q86W50 562 aaKnown RBP9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 CCSER2Q9H7U1 834 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 PCOLCE2Q9UKZ9 415 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
TM9SF3-204ENST00000475401 GSC2O15499 205 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 CILPO75339 1184 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 NFICP08651 508 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 ZNF507Q8TCN5 953 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 ACSS3Q9H6R3 686 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.94
TM9SF3-204ENST00000475401 FAM221AA4D161 298 aa9.14□□□□□ -0.95
TM9SF3-204ENST00000475401 APOBRQ0VD83 1088 aa9.14□□□□□ -0.95
TM9SF3-204ENST00000475401 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
TM9SF3-204ENST00000475401 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms