RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 TTF1Q15361 905 aaPredicted RBP10□□□□□ -0.81
FDPS-209ENST00000471117 LRRFIP1Q32MZ4 808 aaKnown RBP10□□□□□ -0.81
FDPS-209ENST00000471117 FBXO33Q7Z6M2 555 aa10□□□□□ -0.81
FDPS-209ENST00000471117 NBPF11Q86T75 865 aa10□□□□□ -0.81
FDPS-209ENST00000471117 SPATA5Q8NB90 893 aa10□□□□□ -0.81
FDPS-209ENST00000471117 IL17RAQ96F46 866 aa10□□□□□ -0.81
FDPS-209ENST00000471117 EYA3Q99504 573 aa10□□□□□ -0.81
FDPS-209ENST00000471117 ANTXR1Q9H6X2 564 aa10□□□□□ -0.81
FDPS-209ENST00000471117 POLLQ9UGP5 575 aa10□□□□□ -0.81
FDPS-209ENST00000471117 PTCH2Q9Y6C5 1203 aa10□□□□□ -0.81
FDPS-209ENST00000471117 CCDC171Q6TFL3 1326 aa10□□□□□ -0.81
FDPS-209ENST00000471117 RPTORQ8N122 1335 aa10□□□□□ -0.81
FDPS-209ENST00000471117 MED23Q9ULK4 1368 aa10□□□□□ -0.81
FDPS-209ENST00000471117 DOCK2Q92608 1830 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 ZBTB22O15209 634 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 RNF113AO15541 343 aaKnown RBP9.99□□□□□ -0.81
FDPS-209ENST00000471117 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
FDPS-209ENST00000471117 CHGBP05060 677 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 KLRK1P26718 216 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 RASGRF1Q13972 1273 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 MCMDC2Q4G0Z9 681 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 PRAMEF18Q5VWM3 479 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 SUPT20HQ8NEM7 779 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 SHISA4Q96DD7 197 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 HTATIP2Q9BUP3 242 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 ZC3H12CQ9C0D7 883 aaKnown RBP9.99□□□□□ -0.81
FDPS-209ENST00000471117 HMG20BQ9P0W2 317 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 DUOX1Q9NRD9 1551 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 IRS2Q9Y4H2 1338 aa9.99□□□□□ -0.81
FDPS-209ENST00000471117 ST18O60284 1047 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 FKBP1BP68106 108 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 KIF4BQ2VIQ3 1234 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 SLFNL1Q499Z3 407 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 ZNF589Q86UQ0 364 aaPredicted RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 TXNRD3Q86VQ6 643 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 MAP4K1Q92918 833 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 KCNB2Q92953 911 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 SEC62Q99442 399 aaKnown RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■□□□□ 9.8
FDPS-209ENST00000471117 HELLSQ9NRZ9 838 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 IQSEC3Q9UPP2 1182 aaPredicted RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 RBM8AQ9Y5S9 174 aaKnown RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
FDPS-209ENST00000471117 PDS5AQ29RF7 1337 aaKnown RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 SPTBN5Q9NRC6 3674 aaKnown RBP9.98□□□□□ -0.81
FDPS-209ENST00000471117 G3V3G9 751 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 PSMD14O00487 310 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 ALDH1A1P00352 501 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 ZFYP08048 801 aaPredicted RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 NEK4P51957 841 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 MAP3K12Q12852 859 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 CCDC129Q6ZRS4 1044 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 DPF2Q92785 391 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 RTFDC1Q9BY42 306 aaPredicted RBP9.97□□□□□ -0.81
FDPS-209ENST00000471117 COA1Q9GZY4 146 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 VPS33BQ9H267 617 aa9.97□□□□□ -0.81
FDPS-209ENST00000471117 IL1R1P14778 569 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 CHAF1AQ13111 956 aaPredicted RBP9.96□□□□□ -0.82
FDPS-209ENST00000471117 NECTIN1Q15223 517 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 CREB3L3Q68CJ9 461 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 IFNL1Q8IU54 200 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 WDR66Q8TBY9 1149 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 GUCD1Q96NT3 240 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.82
FDPS-209ENST00000471117 CD209Q9NNX6 404 aa9.96□□□□□ -0.82
FDPS-209ENST00000471117 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
FDPS-209ENST00000471117 ALPK3Q96L96 1907 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 TNFRSF10AO00220 468 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 IGF2BP3O00425 579 aaKnown RBP eCLIP9.95□□□□□ -0.82
FDPS-209ENST00000471117 SLC27A2O14975 620 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 EVI5O60447 810 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
FDPS-209ENST00000471117 SP3Q02447 781 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 CRHR2Q13324 411 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 PRKG1Q13976 671 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 SPTY2D1Q68D10 685 aaPredicted RBP9.95□□□□□ -0.82
FDPS-209ENST00000471117 ZGPATQ8N5A5 531 aaKnown RBP9.95□□□□□ -0.82
FDPS-209ENST00000471117 APPBP2Q92624 585 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 OSBP2Q969R2 916 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 UPF3BQ9BZI7 483 aaKnown RBP9.95□□□□□ -0.82
FDPS-209ENST00000471117 LRP2BPQ9P2M1 347 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
FDPS-209ENST00000471117 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms