RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 AK7Q96M32 723 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 RUFY1Q96T51 708 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 GREM2Q9H772 168 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 TAB2Q9NYJ8 693 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 PHKG2P15735 406 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 OAS2P29728 719 aaKnown RBP12.2□□□□□ -0.46
CHD3-208ENST00000470531 PLBD2Q8NHP8 589 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 MACROD2A1Z1Q3 448 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 TFRCP02786 760 aaKnown RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 CLCN6P51797 869 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 H0YHG0 523 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 KIF2AO00139 706 aaPredicted RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 CCP110O43303 1012 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 MYO1BO43795 1136 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 NLRP12P59046 1061 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 CCZ1BP86790 482 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 IQCB1Q15051 598 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 LOC102724159A0A0B4J2E5 919 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 CTDNEP1O95476 244 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 PWP2Q15269 919 aaKnown RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 NAA16Q6N069 864 aaPredicted RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
CHD3-208ENST00000470531 CTNND2Q9UQB3 1225 aa12.19□□□□□ -0.46
CHD3-208ENST00000470531 CAVIN2O95810 425 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 ETF1P62495 437 aaKnown RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 TTC19Q6DKK2 380 aaPredicted RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 CALCOCO1Q9P1Z2 691 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 SOWAHDA6NJG2 315 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 BCAMP50895 628 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 APPBP2Q92624 585 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 HNRNPH2P55795 449 aaKnown RBP12.18□□□□□ -0.46
CHD3-208ENST00000470531 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 ZNF622Q969S3 477 aaKnown RBP eCLIP12.18□□□□□ -0.463e-6■■■■□ 21.4
CHD3-208ENST00000470531 MRFAP1L1Q96HT8 127 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
CHD3-208ENST00000470531 CYP27B1O15528 508 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 ATP2C2O75185 946 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 ARHGEF25Q86VW2 580 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 ELP1O95163 1332 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 TXLNAP40222 546 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 GRIN1Q05586 938 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 CCDC181Q5TID7 509 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 EPSTI1Q96J88 318 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 PPP2R2CQ9Y2T4 447 aa12.17□□□□□ -0.46
CHD3-208ENST00000470531 CCDC175P0C221 793 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 UBXN1Q04323 297 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 CTCFLQ8NI51 663 aaPredicted RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 TRIM75PA6NK02 468 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 G3V3G9 751 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 HOXB7P09629 217 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 E4F1Q66K89 784 aaPredicted RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 MKNK2Q9HBH9 465 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 GUCY1A2P33402 732 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 MTIF2P46199 727 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 POSTNQ15063 836 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 KCTD19Q17RG1 926 aaPredicted RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 TOGARAM2Q6ZUX3 1019 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
CHD3-208ENST00000470531 CEP170BQ9Y4F5 1589 aaPredicted RBP12.16□□□□□ -0.46
CHD3-208ENST00000470531 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms