RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 C7orf61Q8IZ16 206 aa23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 SCYL3Q8IZE3 742 aa23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 DEFB123Q8N688 67 aa23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 FAM198AQ9UFP1 575 aa23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 ZMYND8Q9ULU4 1186 aaPredicted RBP23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
NCKIPSD-209ENST00000470006 LDHBP07195 334 aaKnown RBP23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 IRF5Q13568 498 aa23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 RABL6Q3YEC7 729 aaPredicted RBP23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 ZFPM1Q8IX07 1006 aa23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 ANKRD44Q8N8A2 993 aa23.75■■□□□ 1.39
NCKIPSD-209ENST00000470006 PTPRAP18433 802 aa23.74■■□□□ 1.39
NCKIPSD-209ENST00000470006 DIS3LQ8TF46 1054 aaKnown RBP23.74■■□□□ 1.39
NCKIPSD-209ENST00000470006 PAK6Q9NQU5 681 aaPredicted RBP23.74■■□□□ 1.39
NCKIPSD-209ENST00000470006 KIF16BQ96L93 1317 aa23.74■■□□□ 1.39
NCKIPSD-209ENST00000470006 DOCK3Q8IZD9 2030 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 TRIM75PA6NK02 468 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 FGFR2P21802 821 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 PRDX5P30044 214 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 ANKRD13CQ8N6S4 541 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 LPIN2Q92539 896 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 CRISPLD2Q9H0B8 497 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 SLC45A1Q9Y2W3 748 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 AFG3L2Q9Y4W6 797 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 UTYO14607 1347 aa23.73■■□□□ 1.39
NCKIPSD-209ENST00000470006 ALPK3Q96L96 1907 aa23.72■■□□□ 1.39
NCKIPSD-209ENST00000470006 PHF20L1A8MW92 1017 aa23.72■■□□□ 1.39
NCKIPSD-209ENST00000470006 RGS3P49796 1198 aa23.72■■□□□ 1.39
NCKIPSD-209ENST00000470006 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.72■■□□□ 1.39
NCKIPSD-209ENST00000470006 GNL3LQ9NVN8 582 aaKnown RBP23.72■■□□□ 1.39
NCKIPSD-209ENST00000470006 DOCK2Q92608 1830 aa23.71■■□□□ 1.39
NCKIPSD-209ENST00000470006 BMP8BP34820 402 aa23.71■■□□□ 1.39
NCKIPSD-209ENST00000470006 Q7L0L9 218 aa23.71■■□□□ 1.39
NCKIPSD-209ENST00000470006 GDF15Q99988 308 aa23.71■■□□□ 1.39
NCKIPSD-209ENST00000470006 SYN1P17600 705 aa23.7■■□□□ 1.38
NCKIPSD-209ENST00000470006 GPR153Q6NV75 609 aa23.69■■□□□ 1.38
NCKIPSD-209ENST00000470006 PNMA3Q9UL41 463 aa23.69■■□□□ 1.38
NCKIPSD-209ENST00000470006 EYA2O00167 538 aa23.68■■□□□ 1.38
NCKIPSD-209ENST00000470006 ENTPD3O75355 529 aa23.68■■□□□ 1.38
NCKIPSD-209ENST00000470006 ANKLE1Q8NAG6 615 aa23.68■■□□□ 1.38
NCKIPSD-209ENST00000470006 NBPF3Q9H094 633 aa23.68■■□□□ 1.38
NCKIPSD-209ENST00000470006 AGTPBP1Q9UPW5 1226 aa23.68■■□□□ 1.38
NCKIPSD-209ENST00000470006 PTPRFP10586 1907 aa23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 CTNND1O60716 968 aaKnown RBP23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 PICALMQ13492 652 aa23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 CCDC84Q86UT8 332 aaPredicted RBP23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 MYH2Q9UKX2 1941 aa23.67■■□□□ 1.38
NCKIPSD-209ENST00000470006 HMGCRP04035 888 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 SLURP2P0DP57 97 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 IDI2Q9BXS1 227 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 HMX1Q9NP08 348 aaPredicted RBP23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 DENND2AQ9ULE3 1009 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 STXBP5LQ9Y2K9 1186 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 DOCK1Q14185 1865 aa23.66■■□□□ 1.38
NCKIPSD-209ENST00000470006 ATRNL1Q5VV63 1379 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 MAGEA10P43363 369 aaPredicted RBP23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 ATP2B3Q16720 1220 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 FAM110CQ1W6H9 321 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 TREML2Q5T2D2 321 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 DZIP1Q86YF9 867 aaKnown RBP23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 TDHQ8IZJ6 230 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 UBE2OQ9C0C9 1292 aaKnown RBP23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 SIL1Q9H173 461 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 C11orf49Q9H6J7 331 aa23.65■■□□□ 1.38
NCKIPSD-209ENST00000470006 RPTORQ8N122 1335 aa23.64■■□□□ 1.38
NCKIPSD-209ENST00000470006 DDTLA6NHG4 134 aaPredicted RBP23.64■■□□□ 1.37
NCKIPSD-209ENST00000470006 SH3BP5LQ7L8J4 393 aa23.64■■□□□ 1.37
NCKIPSD-209ENST00000470006 LRIT3Q3SXY7 679 aa23.63■■□□□ 1.37
NCKIPSD-209ENST00000470006 ZGPATQ8N5A5 531 aaKnown RBP23.63■■□□□ 1.37
NCKIPSD-209ENST00000470006 CEP126Q9P2H0 1117 aa23.63■■□□□ 1.37
NCKIPSD-209ENST00000470006 PHIPQ8WWQ0 1821 aa23.63■■□□□ 1.37
NCKIPSD-209ENST00000470006 GCLCP48506 637 aaPredicted RBP23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 TRIM32Q13049 653 aa23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 SLF2Q8IX21 1173 aa23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 USP44Q9H0E7 712 aa23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 MTMR10Q9NXD2 777 aa23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 ABCF2Q9UG63 623 aa23.62■■□□□ 1.37
NCKIPSD-209ENST00000470006 SALL1Q9NSC2 1324 aa23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 PHKA1P46020 1223 aa23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 RFX5P48382 616 aaPredicted RBP23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 SPP2Q13103 211 aa23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 PABPC4Q13310 644 aaKnown RBP eCLIP23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 DDX60LQ5H9U9 1706 aaKnown RBP23.61■■□□□ 1.37
NCKIPSD-209ENST00000470006 SEMA3EO15041 775 aa23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 MAP3K10Q02779 954 aa23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 ATG9AQ7Z3C6 839 aa23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 PROCA1Q8NCQ7 364 aaPredicted RBP23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 DDX4Q9NQI0 724 aaKnown RBP23.6■■□□□ 1.37
NCKIPSD-209ENST00000470006 BTDP43251 543 aa23.59■■□□□ 1.37
NCKIPSD-209ENST00000470006 FAM196BA6NMK8 535 aa23.58■■□□□ 1.37
NCKIPSD-209ENST00000470006 CYP2B6P20813 491 aa23.58■■□□□ 1.37
NCKIPSD-209ENST00000470006 HMGCS2P54868 508 aa23.58■■□□□ 1.37
NCKIPSD-209ENST00000470006 MRPL50Q8N5N7 158 aaKnown RBP23.58■■□□□ 1.37
NCKIPSD-209ENST00000470006 GJD2Q9UKL4 321 aa23.58■■□□□ 1.37
NCKIPSD-209ENST00000470006 GAKO14976 1311 aa23.58■■□□□ 1.36
NCKIPSD-209ENST00000470006 PTPRCP08575 1304 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms