RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PALLDQ8WX93 1383 aa9.09□□□□□ -0.96
TPM3-215ENST00000469717 TMEM2Q9UHN6 1383 aa9.09□□□□□ -0.96
TPM3-215ENST00000469717 MYL6BP14649 208 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 SLC35F6Q8N357 371 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 RNF40O75150 1001 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 NOM1Q5C9Z4 860 aaKnown RBP9.08□□□□□ -0.96
TPM3-215ENST00000469717 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 POLR3EQ9NVU0 708 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 TNNI3KQ59H18 835 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 MYCBPQ99417 103 aaPredicted RBP9.08□□□□□ -0.96
TPM3-215ENST00000469717 FPGT-TNNI3KV9GXZ4 949 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 LMTK3Q96Q04 1460 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 KLF18A0A0U1RQI7 1052 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 GOLGA8BA8MQT2 603 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 CBFA2T2O43439 604 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 STX10O60499 249 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 CMA1P23946 247 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 CASP1P29466 404 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 STX17P56962 302 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 SPECC1LQ69YQ0 1117 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 FAM43BQ6ZT52 329 aaPredicted RBP9.08□□□□□ -0.96
TPM3-215ENST00000469717 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
TPM3-215ENST00000469717 TRIM10Q9UDY6 481 aa9.08□□□□□ -0.96
TPM3-215ENST00000469717 FMN2Q9NZ56 1722 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 CDC25AP30304 524 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 PSEN1P49768 467 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 NEUROD6Q96NK8 337 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 CDC23Q9UJX2 597 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 KIF13AQ9H1H9 1805 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 YEATS4O95619 227 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 HSPD1P10809 573 aaKnown RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 TIMM10P62072 90 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 AKAP17AQ02040 695 aaKnown RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 CTR9Q6PD62 1173 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 HPS5Q9UPZ3 1129 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 ENC1O14682 589 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 SYF2O95926 243 aaKnown RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 ATP5JP18859 108 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 IBSPP21815 317 aaPredicted RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 MRPS25P82663 173 aaKnown RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 PPARDQ03181 441 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
TPM3-215ENST00000469717 HSP90B2PQ58FF3 399 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 FCHSD1Q86WN1 690 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 PHKBQ93100 1093 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 DEF6Q9H4E7 631 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 HDAC6Q9UBN7 1215 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 RAB21Q9UL25 225 aa9.07□□□□□ -0.96
TPM3-215ENST00000469717 TOM1O60784 492 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 CCDC175P0C221 793 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 CCT5P48643 541 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 RBL2Q08999 1139 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 FKBP15Q5T1M5 1219 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 OLFM4Q6UX06 510 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 TADA2BQ86TJ2 420 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 NRXN3Q9Y4C0 1643 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 EXOC5O00471 708 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 ATL3Q6DD88 541 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 IGSF22Q8N9C0 903 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 MSANTD4Q8NCY6 345 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 FAM212AQ96EL1 285 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 AGXT2Q9BYV1 514 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 TATP17735 454 aaPredicted RBP9.06□□□□□ -0.96
TPM3-215ENST00000469717 USP5P45974 858 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
TPM3-215ENST00000469717 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
TPM3-215ENST00000469717 SLC9C2Q5TAH2 1124 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 KCNV1Q6PIU1 500 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
TPM3-215ENST00000469717 LINS1Q8NG48 757 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
TPM3-215ENST00000469717 RNF225M0QZC1 329 aaPredicted RBP9.05□□□□□ -0.96
TPM3-215ENST00000469717 M0R2C6 588 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 CPLX1O14810 134 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 EIF3JO75822 258 aaKnown RBP9.05□□□□□ -0.96
TPM3-215ENST00000469717 MYBL2P10244 700 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 SLC39A6Q13433 755 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 SLC39A14Q15043 492 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 RIC3Q7Z5B4 369 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
TPM3-215ENST00000469717 MYD88Q99836 296 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 MAN1B1Q9UKM7 699 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 HPSEQ9Y251 543 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 NWD1Q149M9 1564 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 USP49Q70CQ1 688 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 MYL10Q9BUA6 226 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 RAI14Q9P0K7 980 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 SLAIN2Q9P270 581 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 MAST3O60307 1309 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 MYH8P13535 1937 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms