RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 C17orf99Q6UX52 265 aa31.44■■■□□ 2.62
ABCA2-213ENST00000466707 CPA4Q9UI42 421 aa31.44■■■□□ 2.62
ABCA2-213ENST00000466707 MROH7-TTC4A0A0A0MT08 1334 aa31.44■■■□□ 2.62
ABCA2-213ENST00000466707 PDHXO00330 501 aa31.43■■■□□ 2.62
ABCA2-213ENST00000466707 IPO8O15397 1037 aaKnown RBP31.43■■■□□ 2.62
ABCA2-213ENST00000466707 GNAI2P04899 355 aa31.43■■■□□ 2.62
ABCA2-213ENST00000466707 CTGFP29279 349 aa31.43■■■□□ 2.62
ABCA2-213ENST00000466707 FAM163AQ96GL9 167 aaPredicted RBP31.43■■■□□ 2.62
ABCA2-213ENST00000466707 NEUROD6Q96NK8 337 aa31.43■■■□□ 2.62
ABCA2-213ENST00000466707 DDTLA6NHG4 134 aaPredicted RBP31.42■■■□□ 2.62
ABCA2-213ENST00000466707 MECOMQ03112 1051 aa31.42■■■□□ 2.62
ABCA2-213ENST00000466707 HMG20BQ9P0W2 317 aa31.42■■■□□ 2.62
ABCA2-213ENST00000466707 PICALMQ13492 652 aa31.41■■■□□ 2.62
ABCA2-213ENST00000466707 SPTY2D1Q68D10 685 aaPredicted RBP31.41■■■□□ 2.62
ABCA2-213ENST00000466707 KIF22Q14807 665 aa31.4■■■□□ 2.62
ABCA2-213ENST00000466707 ZSCAN29Q8IWY8 852 aaPredicted RBP31.4■■■□□ 2.62
ABCA2-213ENST00000466707 SLF2Q8IX21 1173 aa31.4■■■□□ 2.62
ABCA2-213ENST00000466707 SCYL3Q8IZE3 742 aa31.4■■■□□ 2.62
ABCA2-213ENST00000466707 SH3TC2Q8TF17 1288 aa31.4■■■□□ 2.62
ABCA2-213ENST00000466707 RHBDL3P58872 404 aa31.39■■■□□ 2.62
ABCA2-213ENST00000466707 MAP3K10Q02779 954 aa31.39■■■□□ 2.62
ABCA2-213ENST00000466707 GPAT2Q6NUI2 795 aa31.39■■■□□ 2.62
ABCA2-213ENST00000466707 ERICH6Q7L0X2 663 aa31.39■■■□□ 2.62
ABCA2-213ENST00000466707 TMEM57Q8N5G2 664 aa31.39■■■□□ 2.62
ABCA2-213ENST00000466707 MYCP01106 439 aaPredicted RBP31.38■■■□□ 2.61
ABCA2-213ENST00000466707 TBC1D9Q6ZT07 1266 aa31.38■■■□□ 2.61
ABCA2-213ENST00000466707 SPATA5Q8NB90 893 aa31.38■■■□□ 2.61
ABCA2-213ENST00000466707 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.38■■■□□ 2.61
ABCA2-213ENST00000466707 MGAMO43451 1857 aa31.38■■■□□ 2.61
ABCA2-213ENST00000466707 GPR75-ASB3A0A0A6YYF3 556 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 CXCL11O14625 94 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 PTPRAP18433 802 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 ARID4AP29374 1257 aaPredicted RBP31.37■■■□□ 2.61
ABCA2-213ENST00000466707 NBPF11Q86T75 865 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 TRIM47Q96LD4 638 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 ZHX2Q9Y6X8 837 aa31.37■■■□□ 2.61
ABCA2-213ENST00000466707 MAST2Q6P0Q8 1798 aa31.36■■■□□ 2.61
ABCA2-213ENST00000466707 NSUN4Q96CB9 384 aaKnown RBP31.36■■■□□ 2.61
ABCA2-213ENST00000466707 TMEM106CQ9BVX2 250 aa31.36■■■□□ 2.61
ABCA2-213ENST00000466707 CYP2C8P10632 490 aa31.35■■■□□ 2.61
ABCA2-213ENST00000466707 MCAMP43121 646 aa31.35■■■□□ 2.61
ABCA2-213ENST00000466707 GORABQ5T7V8 394 aa31.35■■■□□ 2.61
ABCA2-213ENST00000466707 PICK1Q9NRD5 415 aa31.35■■■□□ 2.61
ABCA2-213ENST00000466707 ATAD5Q96QE3 1844 aa31.34■■■□□ 2.61
ABCA2-213ENST00000466707 A0A0G2JLL6 359 aaPredicted RBP31.34■■■□□ 2.61
ABCA2-213ENST00000466707 GNRH1P01148 92 aa31.34■■■□□ 2.61
ABCA2-213ENST00000466707 PSMC4P43686 418 aa31.34■■■□□ 2.61
ABCA2-213ENST00000466707 G3BP1Q13283 466 aaKnown RBP eCLIP31.34■■■□□ 2.61
ABCA2-213ENST00000466707 PRRT2Q7Z6L0 340 aaPredicted RBP31.34■■■□□ 2.61
ABCA2-213ENST00000466707 CCDC84Q86UT8 332 aaPredicted RBP31.34■■■□□ 2.61
ABCA2-213ENST00000466707 AFG3L2Q9Y4W6 797 aa31.34■■■□□ 2.61
ABCA2-213ENST00000466707 MYO5AQ9Y4I1 1855 aaKnown RBP31.33■■■□□ 2.61
ABCA2-213ENST00000466707 ZKSCAN2Q63HK3 967 aa31.33■■■□□ 2.61
ABCA2-213ENST00000466707 PARK7Q99497 189 aaKnown RBP31.33■■■□□ 2.61
ABCA2-213ENST00000466707 SRRDQ9UH36 339 aa31.33■■■□□ 2.61
ABCA2-213ENST00000466707 FAM196BA6NMK8 535 aa31.32■■■□□ 2.6
ABCA2-213ENST00000466707 BCRP11274 1271 aa31.32■■■□□ 2.6
ABCA2-213ENST00000466707 OSBPP22059 807 aa31.32■■■□□ 2.6
ABCA2-213ENST00000466707 SLC4A8Q2Y0W8 1093 aa31.32■■■□□ 2.6
ABCA2-213ENST00000466707 SIPA1L1O43166 1804 aa31.32■■■□□ 2.6
ABCA2-213ENST00000466707 CDK5RAP2Q96SN8 1893 aa31.31■■■□□ 2.6
ABCA2-213ENST00000466707 PRMT2P55345 433 aa31.31■■■□□ 2.6
ABCA2-213ENST00000466707 POLA2Q14181 598 aa31.31■■■□□ 2.6
ABCA2-213ENST00000466707 RAI14Q9P0K7 980 aa31.31■■■□□ 2.6
ABCA2-213ENST00000466707 COL2A1P02458 1487 aaPredicted RBP31.3■■■□□ 2.6
ABCA2-213ENST00000466707 CTNND1O60716 968 aaKnown RBP31.3■■■□□ 2.6
ABCA2-213ENST00000466707 GADL1Q6ZQY3 521 aa31.3■■■□□ 2.6
ABCA2-213ENST00000466707 C1orf115Q9H7X2 142 aa31.3■■■□□ 2.6
ABCA2-213ENST00000466707 NPM3O75607 178 aaKnown RBP31.29■■■□□ 2.6
ABCA2-213ENST00000466707 FMNL1O95466 1100 aaPredicted RBP31.29■■■□□ 2.6
ABCA2-213ENST00000466707 GSTO1P78417 241 aa31.29■■■□□ 2.6
ABCA2-213ENST00000466707 LOC285556D6RIA3 1793 aa31.28■■■□□ 2.6
ABCA2-213ENST00000466707 LDHCP07864 332 aa31.28■■■□□ 2.6
ABCA2-213ENST00000466707 MTFR1Q15390 333 aa31.28■■■□□ 2.6
ABCA2-213ENST00000466707 FASTKD5Q7L8L6 764 aaKnown RBP31.28■■■□□ 2.6
ABCA2-213ENST00000466707 SSH3Q8TE77 659 aa31.28■■■□□ 2.6
ABCA2-213ENST00000466707 SNRKQ9NRH2 765 aa31.28■■■□□ 2.6
ABCA2-213ENST00000466707 MYPNQ86TC9 1320 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 TRIM75PA6NK02 468 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 UQCRFS1P1P0C7P4 283 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 HNRNPUQ00839 825 aaKnown RBP eCLIP31.27■■■□□ 2.6
ABCA2-213ENST00000466707 TNNI3KQ59H18 835 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 DBNDD2Q9BQY9 259 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 OSBPL5Q9H0X9 879 aaPredicted RBP31.27■■■□□ 2.6
ABCA2-213ENST00000466707 FPGT-TNNI3KV9GXZ4 949 aa31.27■■■□□ 2.6
ABCA2-213ENST00000466707 FOCADQ5VW36 1801 aa31.26■■■□□ 2.6
ABCA2-213ENST00000466707 TBC1D12O60347 775 aa31.26■■■□□ 2.59
ABCA2-213ENST00000466707 LRP2BPQ9P2M1 347 aa31.26■■■□□ 2.59
ABCA2-213ENST00000466707 RLBP1P12271 317 aa31.25■■■□□ 2.59
ABCA2-213ENST00000466707 ATP8B2P98198 1209 aa31.25■■■□□ 2.59
ABCA2-213ENST00000466707 PRKCZQ05513 592 aa31.25■■■□□ 2.59
ABCA2-213ENST00000466707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.25■■■□□ 2.59
ABCA2-213ENST00000466707 GPR108Q9NPR9 543 aa31.25■■■□□ 2.59
ABCA2-213ENST00000466707 MAP4K4O95819 1239 aaPredicted RBP31.24■■■□□ 2.59
ABCA2-213ENST00000466707 RRP1BQ14684 758 aaKnown RBP31.24■■■□□ 2.59
ABCA2-213ENST00000466707 TEX11Q8IYF3 940 aa31.24■■■□□ 2.59
ABCA2-213ENST00000466707 RAET1EQ8TD07 263 aa31.24■■■□□ 2.59
ABCA2-213ENST00000466707 SH3RF3Q8TEJ3 882 aaPredicted RBP31.24■■■□□ 2.59
ABCA2-213ENST00000466707 SLC45A1Q9Y2W3 748 aa31.24■■■□□ 2.59
ABCA2-213ENST00000466707 HOXD10P28358 340 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms