RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
ATG4B-214ENST00000465399 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
ATG4B-214ENST00000465399 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
ATG4B-214ENST00000465399 SRRDQ9UH36 339 aa17.59■□□□□ 0.41
ATG4B-214ENST00000465399 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-214ENST00000465399 RARSP54136 660 aaKnown RBP17.58■□□□□ 0.4
ATG4B-214ENST00000465399 MOGSQ13724 837 aa17.58■□□□□ 0.4
ATG4B-214ENST00000465399 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
ATG4B-214ENST00000465399 FASTKD5Q7L8L6 764 aaKnown RBP17.58■□□□□ 0.4
ATG4B-214ENST00000465399 RAET1EQ8TD07 263 aa17.58■□□□□ 0.4
ATG4B-214ENST00000465399 XAGE2Q96GT9 111 aa17.58■□□□□ 0.4
ATG4B-214ENST00000465399 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
ATG4B-214ENST00000465399 MROH7-TTC4A0A0A0MT08 1334 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 MYPNQ86TC9 1320 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 PHF20L1A8MW92 1017 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 OSBPP22059 807 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 CTGFP29279 349 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 BTDP43251 543 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 TFCP2Q12800 502 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 PICALMQ13492 652 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 MTX1Q13505 466 aa17.57■□□□□ 0.4
ATG4B-214ENST00000465399 HABP4Q5JVS0 413 aaKnown RBP17.57■□□□□ 0.4
ATG4B-214ENST00000465399 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-214ENST00000465399 A0A0G2JLL6 359 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-214ENST00000465399 PTPRAP18433 802 aa17.56■□□□□ 0.4
ATG4B-214ENST00000465399 FCGRTP55899 365 aa17.56■□□□□ 0.4
ATG4B-214ENST00000465399 GPAT2Q6NUI2 795 aa17.56■□□□□ 0.4
ATG4B-214ENST00000465399 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
ATG4B-214ENST00000465399 PRRT2Q7Z6L0 340 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-214ENST00000465399 NEUROD6Q96NK8 337 aa17.56■□□□□ 0.4
ATG4B-214ENST00000465399 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-214ENST00000465399 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
ATG4B-214ENST00000465399 CTNND1O60716 968 aaKnown RBP17.55■□□□□ 0.4
ATG4B-214ENST00000465399 CYP2C8P10632 490 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 GRK4P32298 578 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 GADL1Q6ZQY3 521 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 AFG3L2Q9Y4W6 797 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 MAST2Q6P0Q8 1798 aa17.55■□□□□ 0.4
ATG4B-214ENST00000465399 BCRP11274 1271 aa17.54■□□□□ 0.4
ATG4B-214ENST00000465399 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
ATG4B-214ENST00000465399 MECOMQ03112 1051 aa17.54■□□□□ 0.4
ATG4B-214ENST00000465399 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
ATG4B-214ENST00000465399 SLC45A1Q9Y2W3 748 aa17.54■□□□□ 0.4
ATG4B-214ENST00000465399 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 GNAI2P04899 355 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 GSTO1P78417 241 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 MTFR1Q15390 333 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 SMCR8Q8TEV9 937 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-214ENST00000465399 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-214ENST00000465399 CEP290O15078 2479 aa17.53■□□□□ 0.4
ATG4B-214ENST00000465399 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 LDHCP07864 332 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 UBXN2AP68543 259 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 PRKCZQ05513 592 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 SLAIN1Q8ND83 568 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
ATG4B-214ENST00000465399 HMG20BQ9P0W2 317 aa17.52■□□□□ 0.4
ATG4B-214ENST00000465399 FOCADQ5VW36 1801 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 COL2A1P02458 1487 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 TBC1D12O60347 775 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 TRIM27P14373 513 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 RHBDL3P58872 404 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 DOCK3Q8IZD9 2030 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 NSUN4Q96CB9 384 aaKnown RBP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATG4B-214ENST00000465399 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
ATG4B-214ENST00000465399 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
ATG4B-214ENST00000465399 SLURP2P0DP57 97 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 CCL5P13501 91 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 ARID4AP29374 1257 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-214ENST00000465399 PI16Q6UXB8 463 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 ZNF384Q8TF68 577 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 RNF208Q9H0X6 261 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
ATG4B-214ENST00000465399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-214ENST00000465399 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
ATG4B-214ENST00000465399 GJB1P08034 283 aa17.49■□□□□ 0.39
ATG4B-214ENST00000465399 UQCRFS1P1P0C7P4 283 aa17.49■□□□□ 0.39
ATG4B-214ENST00000465399 GJA8P48165 433 aa17.49■□□□□ 0.39
ATG4B-214ENST00000465399 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
ATG4B-214ENST00000465399 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
ATG4B-214ENST00000465399 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-214ENST00000465399 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-214ENST00000465399 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 FAM196BA6NMK8 535 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 H0YGN5 161 aa17.48■□□□□ 0.39
ATG4B-214ENST00000465399 MCAMP43121 646 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms