RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
MRPL55-225ENST00000465268 GPR108Q9NPR9 543 aa18.36■□□□□ 0.53
MRPL55-225ENST00000465268 CETPP11597 493 aa18.35■□□□□ 0.53
MRPL55-225ENST00000465268 SP3Q02447 781 aa18.35■□□□□ 0.53
MRPL55-225ENST00000465268 PPATQ06203 517 aa18.35■□□□□ 0.53
MRPL55-225ENST00000465268 OS9Q13438 667 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-225ENST00000465268 SNAPC2Q13487 334 aa18.35■□□□□ 0.53
MRPL55-225ENST00000465268 NOL9Q5SY16 702 aaKnown RBP18.35■□□□□ 0.53
MRPL55-225ENST00000465268 CCDC8Q9H0W5 538 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-225ENST00000465268 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
MRPL55-225ENST00000465268 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
MRPL55-225ENST00000465268 UQCRFS1P1P0C7P4 283 aa18.34■□□□□ 0.53
MRPL55-225ENST00000465268 MAP3K10Q02779 954 aa18.34■□□□□ 0.53
MRPL55-225ENST00000465268 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
MRPL55-225ENST00000465268 ZFYVE28Q9HCC9 887 aa18.34■□□□□ 0.53
MRPL55-225ENST00000465268 DBNLQ9UJU6 430 aaKnown RBP18.34■□□□□ 0.53
MRPL55-225ENST00000465268 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
MRPL55-225ENST00000465268 LAMB1P07942 1786 aa18.34■□□□□ 0.53
MRPL55-225ENST00000465268 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.53
MRPL55-225ENST00000465268 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
MRPL55-225ENST00000465268 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
MRPL55-225ENST00000465268 SLF2Q8IX21 1173 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 ERO1AQ96HE7 468 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.52
MRPL55-225ENST00000465268 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 ZAP70P43403 619 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
MRPL55-225ENST00000465268 EFCC1Q9HA90 598 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 PIH1D3Q9NQM4 214 aaKnown RBP18.32■□□□□ 0.52
MRPL55-225ENST00000465268 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 EXOC6BQ9Y2D4 811 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
MRPL55-225ENST00000465268 TLR2O60603 784 aa18.31■□□□□ 0.52
MRPL55-225ENST00000465268 GPAT2Q6NUI2 795 aa18.31■□□□□ 0.52
MRPL55-225ENST00000465268 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
MRPL55-225ENST00000465268 CENPFP49454 3210 aa18.31■□□□□ 0.52
MRPL55-225ENST00000465268 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-225ENST00000465268 PTPRAP18433 802 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 CTGFP29279 349 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 GSTO1P78417 241 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 RRP1BQ14684 758 aaKnown RBP18.3■□□□□ 0.52
MRPL55-225ENST00000465268 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 SCYL3Q8IZE3 742 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 ZHX2Q9Y6X8 837 aa18.3■□□□□ 0.52
MRPL55-225ENST00000465268 TNRC18O15417 2968 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-225ENST00000465268 PDHXO00330 501 aa18.29■□□□□ 0.52
MRPL55-225ENST00000465268 LDHCP07864 332 aa18.29■□□□□ 0.52
MRPL55-225ENST00000465268 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
MRPL55-225ENST00000465268 ZNF512BQ96KM6 892 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-225ENST00000465268 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
MRPL55-225ENST00000465268 AATFQ9NY61 560 aaKnown RBP eCLIP18.29■□□□□ 0.52
MRPL55-225ENST00000465268 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
MRPL55-225ENST00000465268 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
MRPL55-225ENST00000465268 ADGRA2Q96PE1 1338 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 MYH2Q9UKX2 1941 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
MRPL55-225ENST00000465268 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-225ENST00000465268 C17orf99Q6UX52 265 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
MRPL55-225ENST00000465268 AFG3L2Q9Y4W6 797 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 BRCA2P51587 3418 aa18.28■□□□□ 0.52
MRPL55-225ENST00000465268 POTEFA5A3E0 1075 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 CXCL11O14625 94 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 PTCH2Q9Y6C5 1203 aa18.27■□□□□ 0.52
MRPL55-225ENST00000465268 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 TBC1D12O60347 775 aa18.26■□□□□ 0.51
MRPL55-225ENST00000465268 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 CYP2C8P10632 490 aa18.26■□□□□ 0.51
MRPL55-225ENST00000465268 DYNLL1P63167 89 aaKnown RBP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 LACTBP83111 547 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 AACSQ86V21 672 aa18.26■□□□□ 0.51
MRPL55-225ENST00000465268 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
MRPL55-225ENST00000465268 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
MRPL55-225ENST00000465268 ZBTB40Q9NUA8 1239 aa18.26■□□□□ 0.51
MRPL55-225ENST00000465268 PPP4CP60510 307 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 JAG1P78504 1218 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 MAPKAPK5Q8IW41 473 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
MRPL55-225ENST00000465268 MKI67P46013 3256 aaKnown RBP18.24■□□□□ 0.51
MRPL55-225ENST00000465268 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
MRPL55-225ENST00000465268 APBB1O00213 710 aa18.24■□□□□ 0.51
MRPL55-225ENST00000465268 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-225ENST00000465268 SHROOM1Q2M3G4 852 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-225ENST00000465268 CYP7A1P22680 504 aa18.23■□□□□ 0.51
MRPL55-225ENST00000465268 GADL1Q6ZQY3 521 aa18.23■□□□□ 0.51
MRPL55-225ENST00000465268 DNAJC18Q9H819 358 aa18.23■□□□□ 0.51
MRPL55-225ENST00000465268 FLT1P17948 1338 aa18.23■□□□□ 0.51
MRPL55-225ENST00000465268 COL2A1P02458 1487 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms