RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 NR2E3Q9Y5X4 410 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 A0A0C4DFX4 3053 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.24
CBX3-205ENST00000462165 DOCK3Q8IZD9 2030 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
CBX3-205ENST00000462165 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
CBX3-205ENST00000462165 FARP2O94887 1054 aaPredicted RBP13.57□□□□□ -0.24
CBX3-205ENST00000462165 SGPL1O95470 568 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 CAPN2P17655 700 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 FASTKD5Q7L8L6 764 aaKnown RBP13.57□□□□□ -0.24
CBX3-205ENST00000462165 ATG9AQ7Z3C6 839 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
CBX3-205ENST00000462165 SCYL3Q8IZE3 742 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 SALL1Q9NSC2 1324 aa13.57□□□□□ -0.24
CBX3-205ENST00000462165 ALPK3Q96L96 1907 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
CBX3-205ENST00000462165 ZFPM1Q8IX07 1006 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 IDI2Q9BXS1 227 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 UNC93B1Q9H1C4 597 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 SLC45A1Q9Y2W3 748 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 ZHX2Q9Y6X8 837 aa13.56□□□□□ -0.24
CBX3-205ENST00000462165 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 ZBTB22O15209 634 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 ADCY3O60266 1144 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 ENTPD3O75355 529 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 PTPRAP18433 802 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 FLT3LGP49771 235 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 MAP3K10Q02779 954 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 IRF5Q13568 498 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
CBX3-205ENST00000462165 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 DENND2AQ9ULE3 1009 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 ZNF521Q96K83 1311 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
CBX3-205ENST00000462165 SEMA3EO15041 775 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 INHAP05111 366 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 RGS3P49796 1198 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 GADL1Q6ZQY3 521 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 PICK1Q9NRD5 415 aa13.54□□□□□ -0.24
CBX3-205ENST00000462165 ANP32CO43423 234 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 CIAO1O76071 339 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 ELNP15502 786 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
CBX3-205ENST00000462165 PAK6Q9NQU5 681 aaPredicted RBP13.53□□□□□ -0.24
CBX3-205ENST00000462165 GAKO14976 1311 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 ATAD5Q96QE3 1844 aa13.53□□□□□ -0.24
CBX3-205ENST00000462165 TNPO2O14787 897 aaKnown RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 EVI5O60447 810 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 PHKA1P46020 1223 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 DEFB118Q96PH6 123 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 CRISPLD2Q9H0B8 497 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 SIL1Q9H173 461 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
CBX3-205ENST00000462165 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.25
CBX3-205ENST00000462165 DDTLA6NHG4 134 aaPredicted RBP13.51□□□□□ -0.25
CBX3-205ENST00000462165 TFRCP02786 760 aaKnown RBP13.51□□□□□ -0.25
CBX3-205ENST00000462165 FAM9BQ8IZU0 186 aa13.51□□□□□ -0.25
CBX3-205ENST00000462165 COA7Q96BR5 231 aa13.51□□□□□ -0.25
CBX3-205ENST00000462165 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
CBX3-205ENST00000462165 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
CBX3-205ENST00000462165 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
CBX3-205ENST00000462165 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
CBX3-205ENST00000462165 SLURP2P0DP57 97 aa13.5□□□□□ -0.25
CBX3-205ENST00000462165 IL15P40933 162 aaPredicted RBP13.5□□□□□ -0.25
CBX3-205ENST00000462165 FAM110CQ1W6H9 321 aa13.5□□□□□ -0.25
CBX3-205ENST00000462165 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
CBX3-205ENST00000462165 SLF2Q8IX21 1173 aa13.5□□□□□ -0.25
CBX3-205ENST00000462165 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
CBX3-205ENST00000462165 SOX1O00570 391 aaPredicted RBP13.49□□□□□ -0.25
CBX3-205ENST00000462165 TBC1D12O60347 775 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 NECAB2Q7Z6G3 386 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 ANKRD13CQ8N6S4 541 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
CBX3-205ENST00000462165 PAWRQ96IZ0 340 aaKnown RBP13.49□□□□□ -0.25
CBX3-205ENST00000462165 STAP2Q9UGK3 403 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
CBX3-205ENST00000462165 PLXNB2O15031 1838 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 MROH7-TTC4A0A0A0MT08 1334 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 LAMA2P24043 3122 aaKnown RBP13.48□□□□□ -0.25
CBX3-205ENST00000462165 E9PSI1 815 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 DLL1O00548 723 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 UBTFL1P0CB47 393 aaPredicted RBP13.48□□□□□ -0.25
CBX3-205ENST00000462165 ADORA1P30542 326 aa13.48□□□□□ -0.25
CBX3-205ENST00000462165 BTDP43251 543 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms